| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2280 |
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| Symbol | |
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| ID | 5713934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2405708 |
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| End bp | 2408494 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268203 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001533617 |
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| Protein GI | 159044823 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCA CGAGTTTTGA CACGCGATTG ATCCAGGTCC TGAGTGCCAT GGCTGCCATG
GCCATTATCG TGGGTTTGGC CGCAATCGGC GTCAATCGCT ATCTTATTTC GACAAAGAAT
GCCTTTGTCG AAACGACCTT GCCTGCCACA ACGCTCGCTA GCCGGATCGG TGCCTCCAGC
GAGCTGGTCG GCGCATTGGC CGCGGCATTC GTGCAAGTGG ATACACAAGA GGACCTCGCG
CAGATTGCAG AGACCCTCAA ACTGGCCGTG GACGATATCG AAGATGGCAT GCAGGAGTTG
GCGGCCATCG CTCCGCCAGA GGCCGATTTT CCGCAGACAT CGAGGACTCG CGATATTCTC
GAGCGCATGA CCGTGAATGC CGGTGCAGAG TTGCAGCTTG CAGCACGGAT CCAGCAAGTC
GGCGAACACG TCGCGCTGGA TGGTGCGCGG CTGGACGCCT TGATCGAGGC CGAGACAGAT
CTGGCGCGGC TGCGGATCAC CGCTGGCATC GCGGACCTTT ACGCGAGCCC GGAGGAAGAC
CCGCGCCCTG GCCTGGACCG ATTGGCCGAT CGTTACTTTT TTGGTTTCGA GCGACTGACA
GAGTTGGCAC GCTTGATTGA TGCCATGCGA ATCCAGTTTC AGCAGGTGCC AGATCTGAAC
ACGCCCGAAG ACGTGCAGGC GGCCCACGAG AGCCTAGCGC GGACGCTCGT CCTGGTGCAG
CGCCGCATGG TTTTTTTGCC GTCACCGCAG GTAGCCCTGG ATGCGACCTC GCTTTTGCAA
AGACAGCAGG CGGCAATCGG TTCCGAAGGA CTCACTGGGA TGGCCCTGGA AAGGCTGGCC
CTCCGGGCTG GCATTGCAAG CGACAGCGCG CTTCTGCAAA GCACAATTGC CGAGCTGGCA
GCGCGCGCGC GCCTCGCCCG CGATGCGGTT CAGGCGGACG GCGCGGCTCA GATCGCTCTG
GCTAGCCAGC GTTCATCGGT CCTTGTGTCC GGGTTGTTCC TTGCGGTTGT GAGCGTCGCG
CTGGTCGCCG CAATGCTGCT TGTCTATGCG CGCAGGCGCC TCATCGGTCG TCTTTCCGAA
ATCTCGCAGC GCATCGTGGC CGTGGCGCGC GGCGACTACG GCAACCCCAT GCCGATCAGC
GGCCACGATG AGATCGGGCG CATGGAAAAG GCACTCAACA TCCTGCGCCG TCGTGCGCAG
GACGAGGCTC GGCTCCGTGA CAGTCTCGAA GAGGCGGTGA TCGCGCGTAC GGGCGATGTT
GTGGCTGAAA TGCGCGCCTC CAATGCCGCA AGGGCCGACG CCGAAGCCGC AAACCGCAGC
AAAAGCGCCT TCCTCGCCCG TATGAGCCAC GAGATCCGAA CGCCTCTGAA TGGCATCATC
GGCATGCTGG ACCTGCTGGA AGCGGAGACA GAGGACCCCG AGCGCAAGGC TCGCACCAAG
ACGGCGCTGA GCTCTGCGCG CGACCTGCGC GAGATCACCA ATGACATCCT GACCTTCGCC
AGCGGGGAAA CCACCGCGGA CCGCGGCAAT CCGGTGCATT TTGTTCTGCG AGAGTTGGTC
GGCCAGATGG GACACCACCT GCAATCCCTT GCGGCTCAAA AAGGGCTGGC CGCGGTGGTT
GATCTCTCAG AGTCCGCGCC CGTTGTTCTT TACGGCGATG CAGTGAAAAT CCGTCAGATC
CTTGGCAACC TGATTTCGAA CGCCGTCAAA TACACGAGGG AAGGCACCGT GACACTGACT
GTCGATCACG CGATGGATGA GCGGTCCGGG CAGCCCGTTC TCAGTTTCAC GGTCGCGGAT
ACCGGTACCG GGATGACATC GCAGGCGCTA GCGCGCGCGT TCGATGCCTA TGCGCGGGCG
GATTCGGCGC GGCAAGCCGG CATTGAGGGA CTGGGGCTGG GGCTGGCCAT CTCACGGAGC
CTGACAGAAG CACTTGGTGG CGCGCTGAGC GTCGAGAGCG AAGCGGGGGT CGGAAGCCGG
TTTTCGCTGA CCGTCCCGCT CTCGTTGGGC GATCCTGAAC AGGTCGCACA GGCCGGGGAC
GACTGGCTGC CCGGGCTGAA GATGTCCCGC GATGTGCTTG TGATCGACGA CCACCGGGTG
AACCTGATGG TTGCACGGGG CTACCTCGAA AAGCTTGGCT GCCGTGTGAC CGAAGCGGGC
ACCGGACGTG CGGCACTGCA GCTCTGTCGG GCGCAGCGTT TCGATCTTGC GTTGATCGAT
CTCGATTTGC CCGACATGCG CGGGGAGGAG GTCGCGGCGG AGTTGCGACG CCACGAAGAT
GCGCCCATGT TGGTCGCCCT GACGGCTCAC TTGGCGCAAG ACACTGCCGA GAGCCGCGCG
CGCCTTGGCT TTGCCCGTAT CCTCACGAAA CCGATCTCGC CGCGTGCACT TGCGGAGGTG
CTGGAGCAAT GCGTTCCTGA CACGGCAATT CGAGACGATA TGTCGGTCAT CGAGAGTCTG
CGCGCCGATA CAGAGGACCT GGGGCCGCAG GTCACGGCTG CCATCGTGCG GGAGTTTCTC
GATGACCTGC CGCGGGCGGT CGATCATCTG TTCTCAAGCG CAGCAGAGGA CAGGCGCAAG
GCAGCGCACA AGCTCAAGGG GGCAGCGTCG AATTTCCGCC TTGATGCGTT CTGCGCGGTC
CTGGCAGCAG TGGAAAAAGC CGATAGCGAT CTGGATGAAG AGTTGCTCCG TGAAGTTGAG
CAGCGTGCCA TGGAGGCCGC CGAGTCCCTC GAAGCCGCGC TTGTCGCGAC AGGACTTCAG
AGCGCGGCCG GATCGACGAA CTGGTAA
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| Protein sequence | MRRTSFDTRL IQVLSAMAAM AIIVGLAAIG VNRYLISTKN AFVETTLPAT TLASRIGASS
ELVGALAAAF VQVDTQEDLA QIAETLKLAV DDIEDGMQEL AAIAPPEADF PQTSRTRDIL
ERMTVNAGAE LQLAARIQQV GEHVALDGAR LDALIEAETD LARLRITAGI ADLYASPEED
PRPGLDRLAD RYFFGFERLT ELARLIDAMR IQFQQVPDLN TPEDVQAAHE SLARTLVLVQ
RRMVFLPSPQ VALDATSLLQ RQQAAIGSEG LTGMALERLA LRAGIASDSA LLQSTIAELA
ARARLARDAV QADGAAQIAL ASQRSSVLVS GLFLAVVSVA LVAAMLLVYA RRRLIGRLSE
ISQRIVAVAR GDYGNPMPIS GHDEIGRMEK ALNILRRRAQ DEARLRDSLE EAVIARTGDV
VAEMRASNAA RADAEAANRS KSAFLARMSH EIRTPLNGII GMLDLLEAET EDPERKARTK
TALSSARDLR EITNDILTFA SGETTADRGN PVHFVLRELV GQMGHHLQSL AAQKGLAAVV
DLSESAPVVL YGDAVKIRQI LGNLISNAVK YTREGTVTLT VDHAMDERSG QPVLSFTVAD
TGTGMTSQAL ARAFDAYARA DSARQAGIEG LGLGLAISRS LTEALGGALS VESEAGVGSR
FSLTVPLSLG DPEQVAQAGD DWLPGLKMSR DVLVIDDHRV NLMVARGYLE KLGCRVTEAG
TGRAALQLCR AQRFDLALID LDLPDMRGEE VAAELRRHED APMLVALTAH LAQDTAESRA
RLGFARILTK PISPRALAEV LEQCVPDTAI RDDMSVIESL RADTEDLGPQ VTAAIVREFL
DDLPRAVDHL FSSAAEDRRK AAHKLKGAAS NFRLDAFCAV LAAVEKADSD LDEELLREVE
QRAMEAAESL EAALVATGLQ SAAGSTNW
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