| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2278 |
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| Symbol | dmsA1 |
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| ID | 5713932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2402247 |
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| End bp | 2404919 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641268201 |
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| Product | dimethyl sulfoxide reductase precursor |
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| Protein accession | YP_001533615 |
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| Protein GI | 159044821 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.630178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCA CGCAACCCAC CCGCCGCGCT TTTATCAAGG GCGGTGCCGC CCTTTTCGGC
AGTGCCAATC TGTTGGGCAC AACAGCATTC GCCGCGCTCG ACCCGAACTC GTTCGACAGC
CGGGTCTTCC ATGCAACGCA TTATGGCCCG TTCGAGGGCG TTGTGCGCGA TGGCAAGCTC
GTGGGTCTGA ATACCATAAT GGATATCGAT GCCCGGCCGA CCGAAATGTT GACCACTGGC
GTCATCGACC GGACCTATGA CAAGTCTCGC ATCAACTACC CGATGGTGCG CAAATCCTAT
CTCGAAGGTT GGGAGACCGG CGACATCAAA CCTGAACTGC GTGGCAAAGA AGAATATGTC
CGCGTCGATT GGGATACCGC CTGGAGCTTG ACCGCCAAAG CCCTTCTCGA CGCGGCGACC
AACCATGGCA ACGAGACGAT TTTCTCTTCG TCCTACGGCG GTTGGTCCAA CGCGGGCACC
TTCCGTCCCA ACGTGCTGCA GGGTCGGTTG ATGAACCTGA TCGGCGGTTG CACAGTGACG
GCAGGTGACT GGTCGGCGGG GGCGTCCCAG GTGGCATTGC CGCATATCAT CGGCGACATG
GAAGTCTATT CCACGCAATC CGCGTGGGAG ACCATCCGCG ACAACACCGA GGTATTCGTG
CTGGTGGGCT GTGACCCGAT CAAGAACAAC CGGGTCGAGT ACCGCGTGGC CGACCACGGG
ATGTATGCGC ATTGGGAAAC CATTCGCGAT GCCGGCGTCA AGTTCATCTC GATCAACCCG
CAGAAAACGG CGTCCGATGA CTATCTCAAT GCCGAATGGG TCAAGATCGT GCCCAACACA
GATGTGGCGC TGTTCTGTGC CATGGCGAAC CATGTTCTGG TGATGGGCCT CGAAGACAAG
GCCTACATGG ATAAGTATAC CGTTGGGTCC GAGAAGTGGG TCGCCTATCT GAAAGGAGAG
ACCGACGGCG TCGAGAAGAC ACCTGAATGG GCTGCGCAGA TCACCGGCAT CGCCGCTGAG
AAGATCCGTG AGATGGCAGA GCTTTTCGCG AAGTCAAACA CCGAAATCGC CGGCGCCTGG
TCGCTTCAAC GTGCCCAGCA CGGCGAGATG ACCCACTGGG CCATAATCAA CTTCGCAGCG
CTTACCGGCA AGATCGGCAA ACCCGGCCAG GGTGTGGGCT TCAGCTGGCA CTATGGCAAC
GGCGGTATGC CGGCCTCTGG CAAATCCAAC CCCGCAGGAC TGTCTCAGGG TCGGAACTTC
GTCAAAACCG TCTGCCCGGC CAGCCGGATC ACCGACATGC TGGAGAACCC CGGCAAAGAG
GTTTTCTACA ACGGGAACAC CCACACCTAT CCGGATGTGA AGGTCGTCTT CAACGCGGGC
AACAACTTCA TGTCTCACCA GCAGGACACC AACCGGCTGA TCAAGGCGCT GGAGAAGGTG
GAAACCGTTG TCAGTGTGGA CGTGTGGTGG ACTGCGGCGA CCCGTTGGTG TGACATCGTT
CTGCCTGCGG CGTCCACCCT GGAACAGGAC GATATCAGCT CCGGCGGCAC CTATTCCAAT
GACAAGGTCT ACGCGATGAA GAAGGTCATC GAGCCTGTGG GCGAGAGCCT GCCGGACTAC
GAAATCTTCG AAGGGTTGGC TGACAAGCTT GGCCTCTGGA TGCAATTCAC TGATGGTGAA
GACAAGATGT ATCACATCAA GCTTGCCTAC GAGAAATCCA GCGCCTCTGC GCATACCCCA
TTCGAGGAGT TCTGGGAAAA GGGATTCGCC CGTCAAGAAG TGCCCGAAGA GGCCCGCAAA
TGGACCCGTC ACGGTGATTT CTACAGCGAC CCCGAAGCAA ACCCACTGCA CACGACATCG
GGCAAGATCG AGATGTTCTG CGAAGACTTC GCGAAACTCG AGATCGATGA CATGCCCGGC
ATGCCGATTT GGATGGAGAA ACACGAGTAT CTTGGCAACG CCAAGGAAGG CCAGTTGCAC
GTTGTCTCGC CCCACCCGTG GTTCCGCCTG CACAGCCAGA TGGACCAGTC GGAAAACTTG
CGCAATCTCT ACAAGGTGCA GGGTCGCGAA CCGGTGCGGA TCAACTCCGA AGATGCCGCG
TCACGCGGAA TCGAGGATGG CGACTTGGTC GAGCTCTACA ACGATCGGGG CACAGTCATT
GCCGGCGCCG TAGTCAGCGA TGAGATCATG CCCGGAGTCG TCTCGATCTA CGAGGGGGCA
TGGCCGCAGC TCGACAGCAA GGGTCGGTGC AACTCGGGGC TGGTCAACTT CCTTACCTCG
ACGCAGCGGT CTTCGGGCGT CGCCCAAGCG ACCACGGCGA ATACGACTCT GTGCTACATG
CGCAAATGCG AGGATCCCGA GGGTCCGAAC ATGGCATATG AAAAACCTCC GATCATCGAG
AATTACGAAC TGGCTGCGAT CGACGAGGAT AAGCTGGGCC TCGATCGGAT CTATGATCTG
ACCGAGAAAC TCCTGGCAGA TTTGGGGCCC GGTGAGAAGA TCTACTTCGA ACGTTGCACG
GTCTGTCACG CGCCGCGCGA AGTGACCCAC TTCACCCAGC AGCAATGGCG CGGCATCACG
CCTTCGATGT TCCCGCGTGC CGGGCTGGAG GGGGACGAGG CGGCCTTGGT CATGGACTAT
CTGATGGAGA ACGCCGCCGA CGCGCCGAGA TAA
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| Protein sequence | MSLTQPTRRA FIKGGAALFG SANLLGTTAF AALDPNSFDS RVFHATHYGP FEGVVRDGKL
VGLNTIMDID ARPTEMLTTG VIDRTYDKSR INYPMVRKSY LEGWETGDIK PELRGKEEYV
RVDWDTAWSL TAKALLDAAT NHGNETIFSS SYGGWSNAGT FRPNVLQGRL MNLIGGCTVT
AGDWSAGASQ VALPHIIGDM EVYSTQSAWE TIRDNTEVFV LVGCDPIKNN RVEYRVADHG
MYAHWETIRD AGVKFISINP QKTASDDYLN AEWVKIVPNT DVALFCAMAN HVLVMGLEDK
AYMDKYTVGS EKWVAYLKGE TDGVEKTPEW AAQITGIAAE KIREMAELFA KSNTEIAGAW
SLQRAQHGEM THWAIINFAA LTGKIGKPGQ GVGFSWHYGN GGMPASGKSN PAGLSQGRNF
VKTVCPASRI TDMLENPGKE VFYNGNTHTY PDVKVVFNAG NNFMSHQQDT NRLIKALEKV
ETVVSVDVWW TAATRWCDIV LPAASTLEQD DISSGGTYSN DKVYAMKKVI EPVGESLPDY
EIFEGLADKL GLWMQFTDGE DKMYHIKLAY EKSSASAHTP FEEFWEKGFA RQEVPEEARK
WTRHGDFYSD PEANPLHTTS GKIEMFCEDF AKLEIDDMPG MPIWMEKHEY LGNAKEGQLH
VVSPHPWFRL HSQMDQSENL RNLYKVQGRE PVRINSEDAA SRGIEDGDLV ELYNDRGTVI
AGAVVSDEIM PGVVSIYEGA WPQLDSKGRC NSGLVNFLTS TQRSSGVAQA TTANTTLCYM
RKCEDPEGPN MAYEKPPIIE NYELAAIDED KLGLDRIYDL TEKLLADLGP GEKIYFERCT
VCHAPREVTH FTQQQWRGIT PSMFPRAGLE GDEAALVMDY LMENAADAPR
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