Gene Dshi_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2271 
Symbol 
ID5713924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2394736 
End bp2395365 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID641268193 
Producttranscriptional regulator 
Protein accessionYP_001533608 
Protein GI159044814 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.850012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA AAACAGGTTC GCATTCGGAA ATCACCGGGC CCCGTGTACG GGCCGCCGCG 
CAGAGCCTGA TTGCGCGCCA TGGCTACGCG GCCGTGTCGA TGCGCCAGAT CGCGCGCGAG
GTCGGCGTGC AGGCCGGGGC GCTTTATCTT TATACCTCCG ACAAGCAATC GCTGCTCTTC
GACCTGATGA GGGTCCATAT GGAAGAGTTG CTCGATGCCG TAGCGGAGGT CGATCTCGAC
GGGAATCCCA CAGAGGCACT GGACCGGTTC GCGCGCTTTC ACATCACTTT CCACCTCGAT
CGCGCGGAGG CGGTGTTCAT CTCCTACATG GAGCTGCGCA ACCTGACACC GGAGAATTTC
GCCCATATCG CGCAGCAACG CGGAAGCTAT GAGGCCTTGC TGGAGGGAAT TCTGAAACGG
GGACATCGGA GCGGGCAGTT CGCCTTGCCC GATACCAAGC TCGCCACCAT GGCGTTGATT
GCGATGTTGA CGGGGCTGAC AACTTGGTTC CGGGATGGGG GTCGGCTTGA CCGCAAGGAG
GTGGAGCGGA TCTATCTTGC TTTGGTGCAC CAGACCGTGA CTTCCGGGGA GATACCATCG
GATATCGCCG CGGTGCGTGC GGTGTCTTGA
 
Protein sequence
MARKTGSHSE ITGPRVRAAA QSLIARHGYA AVSMRQIARE VGVQAGALYL YTSDKQSLLF 
DLMRVHMEEL LDAVAEVDLD GNPTEALDRF ARFHITFHLD RAEAVFISYM ELRNLTPENF
AHIAQQRGSY EALLEGILKR GHRSGQFALP DTKLATMALI AMLTGLTTWF RDGGRLDRKE
VERIYLALVH QTVTSGEIPS DIAAVRAVS