| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2266 |
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| Symbol | |
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| ID | 5713919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2389926 |
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| End bp | 2391176 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268188 |
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| Product | putative sarcosine oxidase, beta subunit |
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| Protein accession | YP_001533603 |
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| Protein GI | 159044809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.547041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCTATT CCGCGCTGGA ACTTCTCAAA CAAGGGCTCT CGGGCAACAA GGGTTGGCCC
CTGCTGTGGC GCAGCCCCGC GCCGAAGCCC GCCTACGATG CGCTCATCAT CGGCGGTGGC
GGGCATGGGC TCGCCACGGC CTATTACCTT GCGCGCAATC ATGGGATGAC CAATGTTGCG
GTGCTGGAAA AGGGGTATCT CGGCAGCGGC AATATCGGCC GTAACACCAC TATCGTACGT
GCCAACTACC TGCTGGCCGG TAATTCCGAG TTCTATTCCC ATTCCTTGAA GCTATGGGAG
GGGATGGAGA CGGATCTGAA CTTCAACGCG ATGCACTCCC AGCGCGGGAT CATCAATCTG
TTCCACTCCG ACGGGCAGCG CGATGCCTTT GCCCGCCGCG GCAACGCCAT GATCAACCAG
GGTGACGATG CGATCCTGCT GGACCGGGAG GGTGTGCGCC GCGAGGTGCC CTATCTGGAT
TTCGACCAGA CCCGCTATCC GATCTATGGC GGGCTGTGGC ACAAGCGCGG CGGGACCGCG
CGCCACGACG CTGTCGCCTG GGGCTATGCC CGCGGAGCCG ACCAGCGTGG TGTTGACCTG
ATCCAGAATT GCGAAGTCAC CGGATTTCTG ATCGAGAACG GCTCTGTACA GGGCGTGCAG
ACCACGCGCG GGGAGATCCG CGCCCCCAAG GTCGGCATGG TCGTGGCGGG TCGCTCGGGG
CAGGTGGCCG AGATGGCGGG CTTCCGTCTG CCCATCGAGA GCCACATCCT GCAGGCCTTC
GTGACCGAAG GGCTGAAACC ATGCATCGAC CAGGTGATTA CCTATGGCAT GGGTCACTTC
TATATCAGCC AGTCCGACAA GGGCGGTCTG GTGTTTGGCG GGGACCTGGA TTTCTACGCC
TCCTATGCGC AGCGCGGCAA CCTGCCGATG GCCGAGCACG TTGTTGAGGC GGGAATGACT
CTGATGCCGA TGATCGGCAA GGCGAAGATG CTGCGCTCCT GGGGCGGGAT CATGGACATG
ACGCCCGACG GCTCGCCAAT CATCGACCAC AGCCCCGTAC AAGGGCTCTA TGTCAACGGG
GGCTGGTGCT ATGGCGGGTT CAAGGCAGTG CCCGCCTCAG GCTGGTGCAT GGCGCATCTC
ATGGCCACGG ATACGGTACA CGAGATCGCT CGACGCTATC GGCTCGACCG GTTCCGCACG
GGGCACCTGA TCGACGAGGA AGCCACGGGC AGTCAGCACA ATCTACACTG A
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| Protein sequence | MRYSALELLK QGLSGNKGWP LLWRSPAPKP AYDALIIGGG GHGLATAYYL ARNHGMTNVA
VLEKGYLGSG NIGRNTTIVR ANYLLAGNSE FYSHSLKLWE GMETDLNFNA MHSQRGIINL
FHSDGQRDAF ARRGNAMINQ GDDAILLDRE GVRREVPYLD FDQTRYPIYG GLWHKRGGTA
RHDAVAWGYA RGADQRGVDL IQNCEVTGFL IENGSVQGVQ TTRGEIRAPK VGMVVAGRSG
QVAEMAGFRL PIESHILQAF VTEGLKPCID QVITYGMGHF YISQSDKGGL VFGGDLDFYA
SYAQRGNLPM AEHVVEAGMT LMPMIGKAKM LRSWGGIMDM TPDGSPIIDH SPVQGLYVNG
GWCYGGFKAV PASGWCMAHL MATDTVHEIA RRYRLDRFRT GHLIDEEATG SQHNLH
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