| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2263 |
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| Symbol | |
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| ID | 5713916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2385725 |
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| End bp | 2386303 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268185 |
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| Product | putative sarcosine oxidase |
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| Protein accession | YP_001533600 |
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| Protein GI | 159044806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.670843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACC CCGCTTCACT CGCACCCGCA TGTCCTTTGC CCGCGGTAAA GATCGGAACG
GTCGCGCTGA CCGAGGTCGC GGTTGGAACC GTCATGTCGG TACAGCCCTA TCCCGGCGCG
GGGCAAGCGG TCTCTACCAA ACTGGCCCAG TTGACCGGGA TACCCTTCCC GGAGCCGGGG
AGATCGGCCG ACTTTGAAGA CTTGCGTGTC CTCTGGGCAG GGCGGGACAC AGCGTTCCTG
GTGGGCGAGG TGCCACCGCT TGACCTGTTG TGCGGCGAGG CCGCGCTCAC GGATCAGTCG
GACGCTTGGG TGGTTTTGCG GCTGAGCGGG TCGCAGGCCC GCGAGGTGCT TGCACGGCTG
ACGCCGCTTG ATCTGCGGGA CACAGCCTTT ACGGAGGGCC AGACGGCGCG CACAGAACTC
GCTCATATGG CGGTCTTGCT GGTTGCGCTG CCCGCTGCAG TGGAGATCTG GCTTATGCGG
TCCATGCGGT TGACGGCCCT CGACAAATTA TCTCAAGCGA TGAAGTCCGT GGCCGCGCGT
GCCGCGCGTG ACCGCGACAC CGGAGATGCT GCGCCGTGA
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| Protein sequence | MADPASLAPA CPLPAVKIGT VALTEVAVGT VMSVQPYPGA GQAVSTKLAQ LTGIPFPEPG
RSADFEDLRV LWAGRDTAFL VGEVPPLDLL CGEAALTDQS DAWVVLRLSG SQAREVLARL
TPLDLRDTAF TEGQTARTEL AHMAVLLVAL PAAVEIWLMR SMRLTALDKL SQAMKSVAAR
AARDRDTGDA AP
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