| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2255 |
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| Symbol | |
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| ID | 5713908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2376242 |
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| End bp | 2378218 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268177 |
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| Product | putative capsule polysaccharide export protein |
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| Protein accession | YP_001533592 |
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| Protein GI | 159044798 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.729539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGTTT CTTCGCTCAG CCACCTGCGG GATCGGGACC TCCGCCGCAT TCTCATCCTT
GCGGGCTCGC GATTGACCAT GGCCAGACCG GGGACCACAC GCCCGCTTGC GCTTTGGGGC
AATGGCGGCA AGAGCGCGCG GCGCGGAACC GCTCTTGCCA GATGCCTCGG CGCGCCTTGC
GTCTATCTCG AAGACAGCTT CCTGCGCTCG GTTCTGCCCG GGCGCGCGGG CGCACCGGTC
CATGGTCTCA CCTTCGACCG GCAACGCCCG TTTTATGACA GCACCGGTCC CAGCGATCTT
GAGGACATGC TCAACACCGC GCCCCTGTCG GACACCGTGC GGGGGAAGGC GATTATAGAC
GCGCTGATCG AAGCCGATCT GAGCAAGTAC AACACCCACG ATCCGACCCT GCCCGCTCCG
GCGGGGCCCT ATGTCCTCGT GATCGACCAA CTGCGCGGCG ATGCATCGAT TGCCGGCGCG
GGCGCGGATG CCGCGCGTTT TACCGAGATG CTGGAGGCCG CACGCGCAGA CCACCCGGGC
AAGCAGATCA TCGTGAAGGG TCACCCGGCA GCGACCGACG CGCGGCCGGG GCATTTTGGC
TCCGCATTTT CGGACCCGGT CTCGCCCTGG ACCCTGATCC GGGGCGCCGA TGCGGTCTAT
ACGGTCAGCT CGCAGATGGG GTTCGAGACG ATCCTATCCG GCAAGCGGCC GCAGATCTTC
GGCACACCTT TCTATGCGGG CTGGGGTCTC AGCGACGATC GCGTCCCGGT TCCCCGGCGG
AAGCGAACTC TCGATCGCGC GCAACTTGCA CTGGCTGTGC TCGGCCTCTA CCCGATCTGG
TATGACCCCA GCCGCGACCG ACTCTGCACG GTCGAAGAGG TGATGGCGGC CCTTGCAGCC
CGCGCCCGCG CCTGGCGGCA GGACCGGGCC GGATATGTCG CCCAGGGCAT GCGCCTGTGG
AAACGCGCAT CCATGACCGC CTTCCACGGG GACGGACCTG TGCGCTATGT CTCTGGCGAA
CAAGAGGCAC TGGACCTTGC CGACCGCAGC GGTCGCCCGA TCCTGAGCTG GGCCAGCCGC
ACGCCACCGG CCATTGTCGA TGCGGCGCGC CAGCGCGATA TGCCTCTGCT GCGGGTCGAG
GATGGCTTCC TGCGCTCCCG CGGACTGGGC GCGAACCTCG TGCCGCCGCT GTCCCTCGTC
CATGACCGGC GCGGCATTTA CTATGACCCG ACTGTCCCCA GCGATCTGGA GCATCTGATT
GCGCGCCGTG CCGCAATCGG CAGCACTGCC CGTGGGCGCG TCCTGCTGCA CCGGCTGCGG
GCCTCCGGAC TGAGCAAATA CAATCTCGAC CTGCCCGGCT ACAGCCCGCC TGACGCGCAC
CGCCGCTGCA TCCTGGTCAT CGGACAGGTC CGCGATGATG CCTCCGTGTT GCTCGGACAG
AGTGGGGTTA TCCCCGACAT CGAACATTTG CTCTTGGCCG CCCGAACCGC CAATCCCGAC
GCCCATATCG TCTACAAACC CCACCCGGAC GTGGAGGCTG GCCTACGAGA CGGGTCGATC
GAGAGCGAAC AGGCCAATGA GATCGCGCGG CGGGTCGACC CGGTATCGGT ACTGGCAGCC
GCGGCGGAGG TCTGGACCCT GTCATCGCTG ATGGGGTTCG AGGCACTTCT TCGGGGCAAG
CCGGTGGTCT GCGCGGGGGT TCCTTTCTAT GCGGGCTGGG GTCTAACCCG AGACCTCGCC
TCTGCCGATC ACCCGGCCTT CGCGCGGCGA ACGGCTCGAC CGGATCTGGC CGCACTGGTC
GAAGCATGTC TGATCGACTA CCCGCGCTAT CACGATCCAG TCTCGAACCT GCCCTGCCCT
GTCGAAACCG TACTCGATCG GCTGGAACAG GAAACCGAAG CAGCGCATAA GCCGTCCCTG
CGTTTGCTTG CCAAGCTGCA GGGACTTCTC GCGTCGCAAT CGTGGATCTG GCGTTAG
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| Protein sequence | MCVSSLSHLR DRDLRRILIL AGSRLTMARP GTTRPLALWG NGGKSARRGT ALARCLGAPC
VYLEDSFLRS VLPGRAGAPV HGLTFDRQRP FYDSTGPSDL EDMLNTAPLS DTVRGKAIID
ALIEADLSKY NTHDPTLPAP AGPYVLVIDQ LRGDASIAGA GADAARFTEM LEAARADHPG
KQIIVKGHPA ATDARPGHFG SAFSDPVSPW TLIRGADAVY TVSSQMGFET ILSGKRPQIF
GTPFYAGWGL SDDRVPVPRR KRTLDRAQLA LAVLGLYPIW YDPSRDRLCT VEEVMAALAA
RARAWRQDRA GYVAQGMRLW KRASMTAFHG DGPVRYVSGE QEALDLADRS GRPILSWASR
TPPAIVDAAR QRDMPLLRVE DGFLRSRGLG ANLVPPLSLV HDRRGIYYDP TVPSDLEHLI
ARRAAIGSTA RGRVLLHRLR ASGLSKYNLD LPGYSPPDAH RRCILVIGQV RDDASVLLGQ
SGVIPDIEHL LLAARTANPD AHIVYKPHPD VEAGLRDGSI ESEQANEIAR RVDPVSVLAA
AAEVWTLSSL MGFEALLRGK PVVCAGVPFY AGWGLTRDLA SADHPAFARR TARPDLAALV
EACLIDYPRY HDPVSNLPCP VETVLDRLEQ ETEAAHKPSL RLLAKLQGLL ASQSWIWR
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