| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2249 |
|---|
| Symbol | nusB |
|---|
| ID | 5713902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2370535 |
|---|
| End bp | 2371014 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641268171 |
|---|
| Product | N utilization substance protein B-like protein |
|---|
| Protein accession | YP_001533586 |
|---|
| Protein GI | 159044792 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.561904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC AATCCGACAA GCTGGCCGCC AAACGCCAGG CGAAGTCCGC CGCGCGGCTC
TATGCGGTGC AGGCGCTTTT CCAGATGGAG GCGGCCGGAC AGTCCGCCGA CAGCGTGATC
CGGGAATTCG AGGATCACCG GTTCGGCGCG ATCTACGAGG AAGGCGAGAT GGCCGAGGGT
CACGTCACCC TCTTTCGCAC CACCGTCGGC GAGGCGGTCA ATTGGCAGGC GAAGATCGAC
CAGCTGACCG ACCGGGCCCT TGCGACCGCT TGGCCCATCG ACCGGATCGA CCCGACGCTG
CGCGCCCTGT TCCGGGCTGC GGGGGCGGAG TTGGTGAGGG CCGACACGCC CCCAAAGGTG
GTGATCAACG AATACGTCGA TCTGGCGCGC GCGTTCTTTC CGGACGGCAA GGAGCCGAAG
TTCGTCAATG CCGTGCTCGA TCACATGGCG CGCGAGGCCA AGCCCGACGC GTTCAGCTGA
|
|---|
| Protein sequence | MSKQSDKLAA KRQAKSAARL YAVQALFQME AAGQSADSVI REFEDHRFGA IYEEGEMAEG
HVTLFRTTVG EAVNWQAKID QLTDRALATA WPIDRIDPTL RALFRAAGAE LVRADTPPKV
VINEYVDLAR AFFPDGKEPK FVNAVLDHMA REAKPDAFS
|
|---|
| |