Gene Dshi_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2246 
Symbol 
ID5713899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2369013 
End bp2369543 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID641268168 
Producthypothetical protein 
Protein accessionYP_001533583 
Protein GI159044789 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.937178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAC ATCTGGAAAG GCTGGCTTTC ATCGACGAGA CATCGCTCAA GACGAACATG 
GCCAAGACCA CCGGCTGGGC CCCGCGCGGG CAACGCCTGG TCGATCACGC GCCGTTCGGG
CATTGGCGCA CCCAGACCTT CATCGGTGCC CTGCGCCATG ATCGCCTCGA TGCCCCGTGG
GTGATCGATG GCGCAATGAA CGGCGAGTTG TTCGACCTCT ATATCGAGAC CCAGCTGGTG
CCGACCTTGG GTCCGGGCGA CGTGGTCATC CTCGACAACT TGTCGAGCCA TAAGAGCCCC
GGCGCAGCCA AGGCCATGCG AGATATCGGC GCGTGGTTCC TGTTCCTGCC GCCCTACAGT
CCCGACCTCA ACCCGATCGA GATGGCCTTC TCAAAGCTCA AGGTCCTGAT CCGAAAGGCT
GCAGCCCGAA CCTACCATGA ACTTTGGCAG GCTGTCGGTC ATGTGTGCGA CCTCTTCACC
GACGAGGAAT GCTACAACTT CTTCAAGGCC GCAGGATATA AAACCGATTA A
 
Protein sequence
MARHLERLAF IDETSLKTNM AKTTGWAPRG QRLVDHAPFG HWRTQTFIGA LRHDRLDAPW 
VIDGAMNGEL FDLYIETQLV PTLGPGDVVI LDNLSSHKSP GAAKAMRDIG AWFLFLPPYS
PDLNPIEMAF SKLKVLIRKA AARTYHELWQ AVGHVCDLFT DEECYNFFKA AGYKTD