Gene Dshi_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2243 
Symbol 
ID5713896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2366910 
End bp2367665 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID641268165 
Producthypothetical protein 
Protein accessionYP_001533580 
Protein GI159044786 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC CAAGCTATCT CGACACCGCA CGGGGCCGCC GCCTCGCGTA TCACCGGACC 
GAAGGCATCG GGCCCTTGGT GGTGTTTCTC GGCGGGCTGA AATCGGACAT GGAGGGGGCG
AAAGCACTCC ATCTCGAAGC CTGGGCGCAG GGCAGGGGAC GCAATTTCCT GCGCTTCGAC
TATTCCGGCC ATGGCCAAAG CAGCGGCGCG TTCGAGGACG GCTCCGTCGG GGAATGGGCG
GAGGACGCAG CGGACATGCT TGCGGCCATG CCCGACGACC GGTTGGTTCT GGTGGGGTCC
TCCATGGGCG GATGGGTGTC GCTGCTCATG GCGCGCGGGC TTGGGGCCCG GGTCGCAGGG
CTTGTGACCA TCGCCGCGGC CCCTGATTTC ACCGAAGACG ACTGGTGGGG CGGCATGACC
GAGACCGAGA AGGCCGAAAT GGCGCGACTG GGCCGGATCG AACGCCCCTC GGACTATGAC
GACAGCCCCT ACATCATCAC TCGCAAGTTC ATCGAGGATG GCCGCCGCAA CCTCGTGTTG
CGCGACCCAC TGCCCTTGTC CATGCCGGTC CGGTTCCTCC ATGGCACCGG CGATACGACC
GTGCCCACGG CCCTCGCCTT GCGGTTGTTG GAGCACGCCG AGGGTCCGGA CATGCGGCTG
ACCCTTGTGG ACGGGGCCGA TCACCGCTTC TCCGACGAGA CCTGTCTCGC GCTGATCACA
GACACCGTTG AAGAGGTGCT TGTCCGCATC CCTTAG
 
Protein sequence
MPEPSYLDTA RGRRLAYHRT EGIGPLVVFL GGLKSDMEGA KALHLEAWAQ GRGRNFLRFD 
YSGHGQSSGA FEDGSVGEWA EDAADMLAAM PDDRLVLVGS SMGGWVSLLM ARGLGARVAG
LVTIAAAPDF TEDDWWGGMT ETEKAEMARL GRIERPSDYD DSPYIITRKF IEDGRRNLVL
RDPLPLSMPV RFLHGTGDTT VPTALALRLL EHAEGPDMRL TLVDGADHRF SDETCLALIT
DTVEEVLVRI P