| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2230 |
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| Symbol | |
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| ID | 5713883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2353581 |
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| End bp | 2354141 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641268152 |
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| Product | putative polyhydroxyalkonate synthesis repressor |
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| Protein accession | YP_001533567 |
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| Protein GI | 159044773 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGAAA CCGGAAAACC GTTGTTGATC AAACGGTACG CGAGCCGACG TCTCTACAAC
ACGGAAACGA GTGACTATGT CACGCTGGAG GATATCGCGA AGTTCATTCG CGAAGGCCGC
GAGGTGCAGA TCGTCGATCT TAAGAGCGGC GACAACCTCA CCCGTCAATA TCTCCTTCAA
ATCATTGCAG AACATGAGAG CCGTGGCGAG AATGTCCTGC CAATCTCGGT GTTGACCGAC
CTGGTGCGGA GCTATGCGGG GCAATCCACC TCCGTGGTGC CCCAGTTCCT CGCGGCGTCC
TTCGAGATGC TGCGCGACAG TCAGGAGAAG ATGATCAACA ACCTCGGGGG CATGCCCAAT
CCCATGGTCG CCGTGCCGGG TTTCGAGCAG ATGCAGAAAC AGCAGAAAGC GTTTCTCGAA
ACAATGATGG GCGGGTGGAC ACCTTCCAGC ACCATGCCGA CCGAGGAGGC GAGCGAAAAG
CCCGAGGACT CCACAGCCGA TATCGACGAT ATAAAGCGGC AATTGGCCGA CCTGCAGAAG
AAGCTTTCCG GACTGAACTA G
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| Protein sequence | MAETGKPLLI KRYASRRLYN TETSDYVTLE DIAKFIREGR EVQIVDLKSG DNLTRQYLLQ
IIAEHESRGE NVLPISVLTD LVRSYAGQST SVVPQFLAAS FEMLRDSQEK MINNLGGMPN
PMVAVPGFEQ MQKQQKAFLE TMMGGWTPSS TMPTEEASEK PEDSTADIDD IKRQLADLQK
KLSGLN
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