| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2227 |
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| Symbol | |
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| ID | 5713880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2350024 |
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| End bp | 2351328 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268149 |
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| Product | putative FAD dependent oxidoreductase |
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| Protein accession | YP_001533564 |
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| Protein GI | 159044770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0806459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC TGCGCGCCAA TGATCGGGAC GGGGCCTACC CGCCGAGCTA CTACGCCAGC
ACGGTGCCCG CGCGCCCCGC CCTGCCGGCG GCACAGGGGC CGATCCATAC GGATGTCTGC
ATCGTGGGGG GCGGATATAC CGGGCTGTCG GCGGCCCTGC ACCTGGCCGA GCGCGGCTAT
GACGTGGTGG TCCTCGAAGC CCAGAGGGTC GGGTTCGGCG CGTCGGGGCG CAACGGGGGG
CAGGTCGCCT CCGGTCCCCG GCTGGATCTG AGCACGCTGG AGGCGCGCTA TGGCCGCGAG
ACCGCCCACG CCCAGTGGGC GCTGGCTCGC GAAGCGCGGA AGCTGGTCGA TGAATTGGTC
GCGCGAGGCC TCGACTGTGA TCTGCGAGCC GGGGTGATCT ATGCCACGGA CCGCGCCGGA
GACGTGGCCG GGTATCACGC GGAGGCCGCC CATGTGCAGG CGGCAGTGGG ATATGACGGG
GTCACGCCAC TGGACCGGGA CCGGATCGCC GCGTTGGTGG GCAGCGCGGT TTACGCGGGC
GGTGTGCTCG ACGCCGGGGC GGCGCACCTG AACCCGCTCA AGCTGGTTCT GGGGCTTGCC
GATCTGGCGC AGGTCGCGGG GGCGCAGATC TTCGAAGGCT CCCAGGTACG CAGCGTCGCG
GATGCAGGCC CCCATGTGGT CGTGACCACG GACGCGGCCA CCATCGCGGC CGAGCAGGTC
ATCCTCGCCG GGAACGGGTA TATCGGCGGC CTGGACAGCG CGACCGCAGC TCATGTCATG
CCGATCAACT CCTACATGGT CGCGACCGAA CCGCTCGGCC CGGACGCGGA TGCGATCCTG
CCCGAGGGGC ATGCGGTCGC CGACAACAAG TTCGTGGTCA ACTATTTCCG CCGCGCGCCG
GACGGGCGGC TCCTGTTCGG GGGCGGCGAA AGCTATCGCT ACCGGTTCAC GCCGGATATT
GCCGGCAAGG TGCGCGGGCC GCTCGAGCGG ATCTTCCCGC AGTTGCGCGG GATCGGGATC
GATTACGCCT GGGGCGGAAC GCTCGCGATC ACCCGCAGCC GCCTGCCGTT TGCGCGCAAG
GTCTCGCCCC GGGTATTTTC GGCAGGCGGG TATTCGGGCC ATGGCGTGGC GCTGTCGCTG
CTCTTCGGCA AGGCGATGGC GGAGGCCGCC GCGGGGGAGC CGGAGCGGTT CAACCAGCTT
GCCGCCCTGC CCCATGCGCC CTTCCCCGGC GGCGCGGCCC TACGCGCGCC GCTGCTCTTG
GGCGCGATGA GCCTTGCCGG CCTGCGGGAT CGCCTGCCGT TCTGA
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| Protein sequence | MDLLRANDRD GAYPPSYYAS TVPARPALPA AQGPIHTDVC IVGGGYTGLS AALHLAERGY
DVVVLEAQRV GFGASGRNGG QVASGPRLDL STLEARYGRE TAHAQWALAR EARKLVDELV
ARGLDCDLRA GVIYATDRAG DVAGYHAEAA HVQAAVGYDG VTPLDRDRIA ALVGSAVYAG
GVLDAGAAHL NPLKLVLGLA DLAQVAGAQI FEGSQVRSVA DAGPHVVVTT DAATIAAEQV
ILAGNGYIGG LDSATAAHVM PINSYMVATE PLGPDADAIL PEGHAVADNK FVVNYFRRAP
DGRLLFGGGE SYRYRFTPDI AGKVRGPLER IFPQLRGIGI DYAWGGTLAI TRSRLPFARK
VSPRVFSAGG YSGHGVALSL LFGKAMAEAA AGEPERFNQL AALPHAPFPG GAALRAPLLL
GAMSLAGLRD RLPF
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