| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2222 |
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| Symbol | |
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| ID | 5713875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2345400 |
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| End bp | 2346128 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268144 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001533559 |
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| Protein GI | 159044765 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TGATCTTCGG CACCGCCCTG GCCACGCTGA TGGCTGGCGC CGCCTTTGCC
GCGAGCGACG GAACAACGGT CCGCATGGGC ACCGAGGGCG CCTATCCTCC GTACAACTTC
CTCAACGACG CGGGCGAGGT CGACGGGTTC GAACGCGAGC TGGGCGACGA GTTGTGCGCA
CGCGCCGAGC TGACCTGCGA ATGGGTCACC AATGACTGGG ATTCGATCAT CCCGAACCTG
GTGTCGGGGA ACTACGACAC GATCATCGCG GGCATGTCGA TCACCGACGA GCGCGACGAG
GTCATCGACT TCACCCAGAA CTACACGCAG CCCGACCCCT CGGCCTTCAT GGGGCTGTCG
GAAGACGTGG ACCTGGAGGG CGGCGTGATC GCGGCCCAGA CCGGCACGAT CCAGGCGAGC
CATATCGCCA GCACCGGCGC GACCCTGATC GAGTTCGCCT CACCGGACGA GACAGTGGCA
GCGGTGCGCA ACGGCGAAGC CGACGCAGTG CTGGCGGACA AGGCGTTCCT CGAACCCTTC
GTGACCGAGA ACGCGGACCT GGTGTTCGTG GGCGAAGATG TGCTGCTCGG CGGTGGCATC
GGCATGGGCC TGCGCGAGAG CGACCCGGAG CTGCGCGCCA AGTTCGACGC GGCGATCCAG
TCCATGAAGG ACGACGGCTC GCTCAACGCG CTGATCGCGA AATGGCTGCC GGGCTCGGCC
CTGTTCTGA
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| Protein sequence | MKTLIFGTAL ATLMAGAAFA ASDGTTVRMG TEGAYPPYNF LNDAGEVDGF ERELGDELCA
RAELTCEWVT NDWDSIIPNL VSGNYDTIIA GMSITDERDE VIDFTQNYTQ PDPSAFMGLS
EDVDLEGGVI AAQTGTIQAS HIASTGATLI EFASPDETVA AVRNGEADAV LADKAFLEPF
VTENADLVFV GEDVLLGGGI GMGLRESDPE LRAKFDAAIQ SMKDDGSLNA LIAKWLPGSA
LF
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