Gene Dshi_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2218 
Symbol 
ID5713871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2343059 
End bp2343469 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID641268140 
Productputative Acyl-CoA thioester hydrolase 
Protein accessionYP_001533555 
Protein GI159044761 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCA ACCCCCCGGA AACCCCCGAT GAAACCCCAA AGGGCGCGTT GACCCTGCGT 
ACCCTTGCGA TGCCCGCGGA TGTGAACGTG AACGGTGACA TTTTCGGCGG CTGGGTGCTC
AGCCAGATGG ACATCGCCGC CGGGATCGTG GCCGGCGAAC GGGCGCAGGG GCGGGTGGCG
ACCGTGGCCA TCGATGCCAT GAAATTCATC CGCCCCGTGA AGGTCGGCGA CGTGCTGTGC
ATCTATGCCG AGATCGAGCG GGTCGGTCGA AGTTCCATGG GCGTGGCGCT GGAGGCCTGG
GTGCTGCGCG GCCGGATCGG GGCGCGGGAA AAGGTCACCG AAGCCCTGTT CACCTTCGTC
GCCATCGACG AGGAGGGCCG GACCCGCCCC GTCCCGAAAC CGCAGGCCTA G
 
Protein sequence
MAPNPPETPD ETPKGALTLR TLAMPADVNV NGDIFGGWVL SQMDIAAGIV AGERAQGRVA 
TVAIDAMKFI RPVKVGDVLC IYAEIERVGR SSMGVALEAW VLRGRIGARE KVTEALFTFV
AIDEEGRTRP VPKPQA