Gene Dshi_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2201 
Symbol 
ID5713854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2328093 
End bp2328536 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID641268123 
Producthypothetical protein 
Protein accessionYP_001533538 
Protein GI159044744 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.735697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC TCATTCCTCC CATCCTGGTT CTGATCCTGC TCTCGGCCCT GGTCCCTCTG 
CGCGTCTTGC ATCCCGAAAC GCTGGTGATG CGCGCCAATG CAGCCATGCC TTGGGATGTT
CCCCTGTCGC TCGGTCTCGT GGTGCTGGCC TGGGCGTTTT GGCATTTCAA GCGCCGGGAT
GCCGAGATCC ACACCTTCCG GCAACCGAAG GTCATGGTCA CCGACGGACC GTTCCGCTAC
AGCCGCAATC CGATGTATCT GGGCTTTTTC CTGCTGCTTC TGGCGGCGGC CTTCTACGTC
AACACCTGGT GTGCGCTGCT TGCCCCATTG GCCTTTCTCC TGACCGCGAT CTTCTGGTAC
ATCCCGCATG AGGAAAAGCG GATGCGAGAC ACCTTCGGAT CCGCCTATGA CGACTACGCA
TGGACAACAA GACGATGGAT CTGA
 
Protein sequence
MTRLIPPILV LILLSALVPL RVLHPETLVM RANAAMPWDV PLSLGLVVLA WAFWHFKRRD 
AEIHTFRQPK VMVTDGPFRY SRNPMYLGFF LLLLAAAFYV NTWCALLAPL AFLLTAIFWY
IPHEEKRMRD TFGSAYDDYA WTTRRWI