| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2197 |
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| Symbol | |
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| ID | 5713850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2324302 |
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| End bp | 2325957 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268119 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001533534 |
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| Protein GI | 159044740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCT ATCAGTACGT CTACCACATG GACGGCGTGT CCAAGACCTA TCCCGGCGGC
AAGAAATGCT TCGAGAACAT CCGCCTCTCC TTCCTTCCGG GCGTCAAGAT CGGCGTCGTC
GGCGTCAACG GCGCGGGCAA GTCCACCCTA ATGAAGATCA TGGCCGGCCT CGACACCGAC
TTCACCGGGG AGGCTTGGGC CGCCGAAGGC GCCCGCGTCG GCTACCTGCC CCAGGAGCCC
GCCCTCGACG AGACCCTCAC CGTGCGCGAG AACGTCATGC TCGGCGTCGC CCCCAAGAAG
GCCATCCTCG ACCGCTACAA CGAGCTGGCG ATGAACTACT CCGACGAGAC CGCCGACGAG
ATGGCGAAGC TCCAGGACGA GATCGACGCG CAAAACCTCT GGGACCTCGA CGCCCAGATC
GACATCGCGA TGGAGGCGCT GCGCTGCCCC CCCGACGACG CCAGCCCCGC GAACCTCTCG
GGCGGGGAGC GCCGCCGCGT CGCACTCTGC AAGCTCCTGC TCGAAGCCCC CGACATGCTG
CTCTTGGACG AGCCCACCAA CCACCTCGAC GCCGAAACCA TCGCCTGGCT CCAGAAACAC
CTGATCGAGT ACAAGGGCAC CATCCTCATC GTCACCCACG ACCGCTACTT CCTCGACGAC
ATCACCGGCT GGATCCTGGA ACTCGACCGC GGCCGCGGCA TCCCCTACGA GGGCAACTAT
TCCGCCTGGC TCGACCAGAA GGCCAAGCGG CTCGAACGCG AGGCCAAGGA AGACAAGGCG
AAACAGAAAA CCCTCGCGCG CGAGCTCGAA TGGATCCGCG CCGGCGCCAA GGCCCGCCAG
GCCAAGCAGA AGGCCCGCAT CAACGCCTAC GAAGAACTCG CCGGCCAGTC GGAGCGCGAA
AAGGTCGGCA AGGCCCAGAT CATCATCCCC AACGGCCCCC GCCTCGGGAG CAAGGTGATC
GAGGTCGAAA ACCTCACCAA AGCTTATGGC GACAAGCTGC TGATCGAGAA CCTCTCCTTC
TCCCTGCCGC CCGGCGGCAT CGTCGGCGTG ATCGGCCCCA ACGGGGCGGG CAAATCCACA
CTCTTTCGCA TGCTGACAGG GCAGGAGCAG CCCGATGGCG GCACGCTCAG CTACGGCGAC
ACGGTGCAAC TGGCCTATGT CGACCAGTCC CGCGACACGC TCGACCCCGC CGCCACCGTC
TGGGAGGAGA TCTCCGGCGG CGGCGAAATC ATCGAGCTTG GCGACGCCCA GATCAACTCC
CGCGCCTATT GCGGCGCGTT CAACTTCAAG GGCGGCGACC AGCAGAAGAA GGTCGGGCTC
CTGTCGGGCG GCGAACGCAA CCGCGTCCAC ATGGCGAAAC TGCTGAAATC CGGCGGCAAT
GTCCTCCTGC TCGATGAACC TACCAACGAT CTTGACGTGG AAACGTTAAG AGCGCTTGAA
GACGCCATCG AGGATTTCGC CGGCTGCGCC GTGGTCATCT CCCACGACCG CTTCTTCCTC
GACCGCCTCT GCACCCACAT CCTCGCCTTC GAGGGCGACG CCCATGTGGA ATGGTTCGAG
GGGAACTTCG AAGCCTACGA GGAAGACAAG GCACGGAGAC TGGGGCCGGA TGCCCTCGAA
CCCAAGCGCG TGAAATACAA GAAATTCACC CGTTAG
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| Protein sequence | MAAYQYVYHM DGVSKTYPGG KKCFENIRLS FLPGVKIGVV GVNGAGKSTL MKIMAGLDTD
FTGEAWAAEG ARVGYLPQEP ALDETLTVRE NVMLGVAPKK AILDRYNELA MNYSDETADE
MAKLQDEIDA QNLWDLDAQI DIAMEALRCP PDDASPANLS GGERRRVALC KLLLEAPDML
LLDEPTNHLD AETIAWLQKH LIEYKGTILI VTHDRYFLDD ITGWILELDR GRGIPYEGNY
SAWLDQKAKR LEREAKEDKA KQKTLARELE WIRAGAKARQ AKQKARINAY EELAGQSERE
KVGKAQIIIP NGPRLGSKVI EVENLTKAYG DKLLIENLSF SLPPGGIVGV IGPNGAGKST
LFRMLTGQEQ PDGGTLSYGD TVQLAYVDQS RDTLDPAATV WEEISGGGEI IELGDAQINS
RAYCGAFNFK GGDQQKKVGL LSGGERNRVH MAKLLKSGGN VLLLDEPTND LDVETLRALE
DAIEDFAGCA VVISHDRFFL DRLCTHILAF EGDAHVEWFE GNFEAYEEDK ARRLGPDALE
PKRVKYKKFT R
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