| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2177 |
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| Symbol | |
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| ID | 5713830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2303499 |
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| End bp | 2304689 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268099 |
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| Product | putative phage portal protein |
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| Protein accession | YP_001533514 |
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| Protein GI | 159044720 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTCA ATCTGTTCCG ACAAAAACAA GACATACCGG CGACGGATCG CGTGCCCGAG
GTCAAGGCGT CGGCCACGAG CCGGGTTGTG GCCATGGGCA GCTCCGGGCG GATTGCCTGG
ACACCGCGGG ATTCGGGGTC GCTGACGCGC AACGGGTTCG CGGGCAATCC GGTGGGGTTT
CGGGCGGTCA AGATGATTGC GGAGGCCGCC GCGGCGCTGC CGCTGGCGTT CCAGGATGCG
GAGCGGCGCT ACGAGGCGCA TCCGCTGATC ACGCTGCTGG CGCGGCCCAG CCAGGCGCAG
GGGCGGGCGG AGTTCTTCGA GGCGCTCTAT GCGCAGCTCC TGCTGACCGG CGACGGTTTC
GTGGAGGCGG TGTTCGCCAA GCCCGAGCTG CCCACGGAGT TGCATGTGCT GCGCTCGGAC
CGGGTGCGGA TCATTCCCGG CGCGGATGGC TGGCCGAGCG CCTATGAGTA CTCGGTCGGG
GCGCACAAGC ACCGGTTCAT GGTCGAGGAG GGGCGCACGC CGATCTGTCA TCTGCGCACG
TTCCATCCGC AGGACGACCA TTACGGGCTG TCCCCGATGC AAGCGGCGGC GACGGCGCTG
GATGTCCATA ACGCGGCGAC CCGGTGGTCA AAGGCGCTGT TGGACAATGC GGCGCGGCCG
TCGGGCGCGT TGGTCTACAA GGGGTCGGAG GGCGACGATA CGCTCTCGCC CGAGCAGTAC
ACGCGGCTGG TCGACGAGAT GGACAGCTAC CACCAGGGTG CGCGCAATGC GGGGCGGCCC
ATGTTGCTGG AAGGCGGGCT CGACTGGAAA CCCATGGGGT TCAGCCCCTC GGACATGGAG
TTCCAGAAGA CCAAGGAGGC TGCGGCGCGC GAGATCGCGC TGGCCTTCGG GGTTCCGCCG
ATGCTGCTGG GGATTCCCGG GGACGCGACC TATGCCAACT ACCAGGAGGC GCACCGGGCG
TTCTATCGCC TGACGGTGCT GCCCTTGGCG CAGAAGGTGA CCGCGTCGCT GGGTCATTGG
CTGACGGATC TGTCGGGGGA CGCCGTGAAT GTCGCGCCCG ATCTGGACAA GATCCCGGCC
CTTGCCGCTG AGCGCGACGC GCAATGGGCG CGGATCGGGA CGGCGAGTTT TCTCACCGAT
GCCGAGAAGC GGGTTCTGCT CGGGCTGCCG GCGGAAATGG ATTGCTCATG A
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| Protein sequence | MVFNLFRQKQ DIPATDRVPE VKASATSRVV AMGSSGRIAW TPRDSGSLTR NGFAGNPVGF
RAVKMIAEAA AALPLAFQDA ERRYEAHPLI TLLARPSQAQ GRAEFFEALY AQLLLTGDGF
VEAVFAKPEL PTELHVLRSD RVRIIPGADG WPSAYEYSVG AHKHRFMVEE GRTPICHLRT
FHPQDDHYGL SPMQAAATAL DVHNAATRWS KALLDNAARP SGALVYKGSE GDDTLSPEQY
TRLVDEMDSY HQGARNAGRP MLLEGGLDWK PMGFSPSDME FQKTKEAAAR EIALAFGVPP
MLLGIPGDAT YANYQEAHRA FYRLTVLPLA QKVTASLGHW LTDLSGDAVN VAPDLDKIPA
LAAERDAQWA RIGTASFLTD AEKRVLLGLP AEMDCS
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