| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2170 |
|---|
| Symbol | |
|---|
| ID | 5713166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2299476 |
|---|
| End bp | 2299889 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641268092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533507 |
|---|
| Protein GI | 159044713 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5437] Predicted secreted protein |
|---|
| TIGRFAM ID | [TIGR02126] phage major tail protein, TP901-1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGC AAAAAGGCAA AGACCTTCTG ATCAAACTGG ACATGACCGG AACGGGTCAG
TTTGAAACCA TCGCCGGTCT TCGGGCCACG CGGATCACCT TCAACACCGA GACGGTCGAT
GTGACCTCCC TCGAGAGCGC GGGCGGGTGG CGCGAGCTGC TGGGCGGTGC CGGGGTCAAG
AGTGCGTCGC TCTCGGGGTC GGGCGTGTTC CGCGACGAGA ATACGGACGA GCGGGCGCGG
CAGATCTTCT TCGACGGGGA AGTGCCGAAC TTCCAGGTGA TCATCCCGGA TTTCGGGATC
GTGGAGGGGC CCTTCATGAT TACCGCGATC GAGTATGCCG GCAGCCAGAA TGGCGAGGCC
AGCTATGAAA TGACCATCGC TTCGGCGGGT CAGATCACCT TCAACGCGAT CTGA
|
|---|
| Protein sequence | MAVQKGKDLL IKLDMTGTGQ FETIAGLRAT RITFNTETVD VTSLESAGGW RELLGGAGVK
SASLSGSGVF RDENTDERAR QIFFDGEVPN FQVIIPDFGI VEGPFMITAI EYAGSQNGEA
SYEMTIASAG QITFNAI
|
|---|
| |