Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2166 |
Symbol | |
ID | 5713162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2297631 |
End bp | 2298263 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641268088 |
Product | hypothetical protein |
Protein accession | YP_001533503 |
Protein GI | 159044709 |
COG category | [S] Function unknown |
COG ID | [COG5448] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02217] conserved hypothetical protein TIGR02217 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCC ATGAAGTGAG GTTCCCCGCG AACCTGAGTT TCGGCTCCAC CGGCGGGCCG GAGCGGCGGA CCGAGATCGT CACCCTGGCC AACGGGTTCG AGGAGCGCAA CACGCCCTGG TCCCAGTCGC GCCGCCGCTA TGACGCGGGC GTGGGGATGC GGTCGCTGAA CGACATCGAG GCGCTGATCG GGTTCTTCGA GGCGCGCCAG GGCCAGATGT ACGGGTTTCG CTGGAAGGAC TGGGCCGACT TCAAGAGTTG TGCGCCCTCG GAAACGGTGG CGTTCGAAGA TCAGGCGCTC GGCAGAGGCG ATGGGGAGAC CCGGATCTTT CAGTTGATCA AAAGGTATCG GTCCGGGGCA CAGTTCTATG CGCGCACCAT CACGAAGCCC GTCGCCGGAA CGGTGCGGGC CGGGATCGAC GGTGTTCAAT TGTCCGAAGC TGTGCATTTC GAGGTGGATA CGGTGGCTGG GCAGCTGGTC TTTACGGACC CTCCGGAGAA CGGGGCGGAG GTGACGGCCG GTTTCGAGTT CGACGTGCCG GTTCGGTTCG ATACGGACCG CATCCGGACG TCGGTTGCGT CCTTCCAGGC CGGGGATATC CCCTCGGTTC CCGTGGTGGA GTTGCGGATA TGA
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Protein sequence | MQFHEVRFPA NLSFGSTGGP ERRTEIVTLA NGFEERNTPW SQSRRRYDAG VGMRSLNDIE ALIGFFEARQ GQMYGFRWKD WADFKSCAPS ETVAFEDQAL GRGDGETRIF QLIKRYRSGA QFYARTITKP VAGTVRAGID GVQLSEAVHF EVDTVAGQLV FTDPPENGAE VTAGFEFDVP VRFDTDRIRT SVASFQAGDI PSVPVVELRI
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