Gene Dshi_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2166 
Symbol 
ID5713162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2297631 
End bp2298263 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID641268088 
Producthypothetical protein 
Protein accessionYP_001533503 
Protein GI159044709 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCC ATGAAGTGAG GTTCCCCGCG AACCTGAGTT TCGGCTCCAC CGGCGGGCCG 
GAGCGGCGGA CCGAGATCGT CACCCTGGCC AACGGGTTCG AGGAGCGCAA CACGCCCTGG
TCCCAGTCGC GCCGCCGCTA TGACGCGGGC GTGGGGATGC GGTCGCTGAA CGACATCGAG
GCGCTGATCG GGTTCTTCGA GGCGCGCCAG GGCCAGATGT ACGGGTTTCG CTGGAAGGAC
TGGGCCGACT TCAAGAGTTG TGCGCCCTCG GAAACGGTGG CGTTCGAAGA TCAGGCGCTC
GGCAGAGGCG ATGGGGAGAC CCGGATCTTT CAGTTGATCA AAAGGTATCG GTCCGGGGCA
CAGTTCTATG CGCGCACCAT CACGAAGCCC GTCGCCGGAA CGGTGCGGGC CGGGATCGAC
GGTGTTCAAT TGTCCGAAGC TGTGCATTTC GAGGTGGATA CGGTGGCTGG GCAGCTGGTC
TTTACGGACC CTCCGGAGAA CGGGGCGGAG GTGACGGCCG GTTTCGAGTT CGACGTGCCG
GTTCGGTTCG ATACGGACCG CATCCGGACG TCGGTTGCGT CCTTCCAGGC CGGGGATATC
CCCTCGGTTC CCGTGGTGGA GTTGCGGATA TGA
 
Protein sequence
MQFHEVRFPA NLSFGSTGGP ERRTEIVTLA NGFEERNTPW SQSRRRYDAG VGMRSLNDIE 
ALIGFFEARQ GQMYGFRWKD WADFKSCAPS ETVAFEDQAL GRGDGETRIF QLIKRYRSGA
QFYARTITKP VAGTVRAGID GVQLSEAVHF EVDTVAGQLV FTDPPENGAE VTAGFEFDVP
VRFDTDRIRT SVASFQAGDI PSVPVVELRI