Gene Dshi_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2162 
Symbol 
ID5713158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2291686 
End bp2292393 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID641268084 
Producthypothetical protein 
Protein accessionYP_001533499 
Protein GI159044705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.683012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA GCCCCAATAT CGAACTGCCC TTCGTCGAGG CGGCGCAGGC GCAGAAGCAC 
GTAACGGTGA ATGAGAGCTT GCTGCGGCTC GACGCGGTCT CGCAGCTTGT TTTGCAGTCG
CTGTCCGAAA CCGTGCCACC CAATGATGCA GAGGATGGGG AGGTGTACGC GGTGCCGCAG
GGTGCGCAGC CTCCCTGGCA AGCCTTGCCT GGCAAGCTCG CGCTGCGGAG CAATGGCGGT
TGGGTTACGA TCACGCCGCG ACCGGGCTGG CAGGCGTGGG TGGTCGAACT CGGCGCGCTT
TGCGTTTTCG ATGGCAGCGG CTGGGTGTCC GTCGGCCCAG GAGCGGCCGG TGCCGGGCCG
AGATTCGAGG CGATCGAATT CGAGCATACT GTCCAGAGTG GTGGTGCTCA GGACACCACG
GTCGTTATCC CTGCGCAGTC CTCGGTGATT GGTGTCACCG CGCGCGTGTC AGATGAAATC
ACAGGCAATT TGACATCCTG GCGGCTTGGT GCGGGAGGCT CCGACAATCG CTACGGATCC
GGGTTTGGAA CGGCGCACAA TTCCTTCGTG CGGGGGCTGA CCGGCGCGCC CTTGGCTTAC
TACGCGGACA CGCCACTGAT CCTGACGCCC GAGAATGGCG CGTTTTCGGG CGGTGCGGTG
CGGTTCGTGA TCCACATGCT TCAGATCGAC ATTCCAGACC TTGTGTGA
 
Protein sequence
MANSPNIELP FVEAAQAQKH VTVNESLLRL DAVSQLVLQS LSETVPPNDA EDGEVYAVPQ 
GAQPPWQALP GKLALRSNGG WVTITPRPGW QAWVVELGAL CVFDGSGWVS VGPGAAGAGP
RFEAIEFEHT VQSGGAQDTT VVIPAQSSVI GVTARVSDEI TGNLTSWRLG AGGSDNRYGS
GFGTAHNSFV RGLTGAPLAY YADTPLILTP ENGAFSGGAV RFVIHMLQID IPDLV