Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2162 |
Symbol | |
ID | 5713158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2291686 |
End bp | 2292393 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641268084 |
Product | hypothetical protein |
Protein accession | YP_001533499 |
Protein GI | 159044705 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.683012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAACA GCCCCAATAT CGAACTGCCC TTCGTCGAGG CGGCGCAGGC GCAGAAGCAC GTAACGGTGA ATGAGAGCTT GCTGCGGCTC GACGCGGTCT CGCAGCTTGT TTTGCAGTCG CTGTCCGAAA CCGTGCCACC CAATGATGCA GAGGATGGGG AGGTGTACGC GGTGCCGCAG GGTGCGCAGC CTCCCTGGCA AGCCTTGCCT GGCAAGCTCG CGCTGCGGAG CAATGGCGGT TGGGTTACGA TCACGCCGCG ACCGGGCTGG CAGGCGTGGG TGGTCGAACT CGGCGCGCTT TGCGTTTTCG ATGGCAGCGG CTGGGTGTCC GTCGGCCCAG GAGCGGCCGG TGCCGGGCCG AGATTCGAGG CGATCGAATT CGAGCATACT GTCCAGAGTG GTGGTGCTCA GGACACCACG GTCGTTATCC CTGCGCAGTC CTCGGTGATT GGTGTCACCG CGCGCGTGTC AGATGAAATC ACAGGCAATT TGACATCCTG GCGGCTTGGT GCGGGAGGCT CCGACAATCG CTACGGATCC GGGTTTGGAA CGGCGCACAA TTCCTTCGTG CGGGGGCTGA CCGGCGCGCC CTTGGCTTAC TACGCGGACA CGCCACTGAT CCTGACGCCC GAGAATGGCG CGTTTTCGGG CGGTGCGGTG CGGTTCGTGA TCCACATGCT TCAGATCGAC ATTCCAGACC TTGTGTGA
|
Protein sequence | MANSPNIELP FVEAAQAQKH VTVNESLLRL DAVSQLVLQS LSETVPPNDA EDGEVYAVPQ GAQPPWQALP GKLALRSNGG WVTITPRPGW QAWVVELGAL CVFDGSGWVS VGPGAAGAGP RFEAIEFEHT VQSGGAQDTT VVIPAQSSVI GVTARVSDEI TGNLTSWRLG AGGSDNRYGS GFGTAHNSFV RGLTGAPLAY YADTPLILTP ENGAFSGGAV RFVIHMLQID IPDLV
|
| |