Gene Dshi_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2150 
SymbolanmK 
ID5713146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2279010 
End bp2280089 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID641268072 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001533487 
Protein GI159044693 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.850012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAA AGCCGCTTTG GGCGCTTGGC TGCATGTCGG GCACTTCGCT GGACGGGGTC 
GATGCAGCAC TGGTGCTGAC TGACGGGGAG CGCGTGCTGG AGCAAGGGCC AAGCGCCTAC
CGACCCTATA GCGCGACGGA GCGTGCGGCC TTGCGCGCGG TGCTGGGCCG TTGGCCGGGG
CCGGGATTGG AAGCAGCACT GGCGGTGGTC CAATCTGCCC ATGCGGAGAT TATCTCTGGA
TTTCAAGATG TTGAAATTGT TGGTTTTCAT GGCCAGACGC TCGCCCATGG TCCACGTGGG
GCCGGCACCC ATCAACTCGG TGACGGGGCG GCGCTGTCAC AGGCGCTTGG TGTGCCCGTG
GTCTGGGATT TTCGCAGCGT GGATGTGTCC CTGGGCGGGG AAGGTGCGCC GCTTGCGCCG
ATTTATCACT GGGCGGTCGC GCGCCATGCG AGATTGGAAA ATCCCGTGTG TTTTCTGAAT
CTTGGTGGTG TCGGGAACCT GACATACGTG GACCCTTCCA AGGGGCCGGA GGCGATTCTG
GCCTTCGACA CCGGCCCGGC AAATGCTCCG ATCGACGACC TGGTGTTGGG GCGGACAGGC
CAGCCTTTTG ACACGGGTGG GGCGCTGGCG GCGGAAGGGC AAATCGTTCA GCCCATCATC
GACCGGCTTC TGGATCAGGA TTATTTTGTA AGAAAACCAC CTAAATCATT GGATAGAAAC
GACTTTTACT GGTTGTTGGA GGCAGTTTGC GAACTAGAGA CGCCTGATGC GGTCGCCACC
CTGACCGCCT GCGCGGCCGC GGCCGTGGCG GCGGGTGTTT CCCTCATGCC CCAAGCACCT
TCGGCGATAG TCCTATGTGG CGGGGGTCGA AAAAACAATT ATATGAAACA GAGCATTGCG
AAATTTACTT CATGTGACGT GACAGACGTC GATGCGCTCG GCTTCGACGG AGACATGATC
GAGGCGCAAG CGTTCGGTTT CATGGCCGTG CGGGTTCTGA ACGGCGCGCC CACGTCCTTC
CCCGGCACCA CGGGGGTCGC GGCGCCCGTG GGGGGGGGCG TCACGAGTGG GCTGAACTGA
 
Protein sequence
MKGKPLWALG CMSGTSLDGV DAALVLTDGE RVLEQGPSAY RPYSATERAA LRAVLGRWPG 
PGLEAALAVV QSAHAEIISG FQDVEIVGFH GQTLAHGPRG AGTHQLGDGA ALSQALGVPV
VWDFRSVDVS LGGEGAPLAP IYHWAVARHA RLENPVCFLN LGGVGNLTYV DPSKGPEAIL
AFDTGPANAP IDDLVLGRTG QPFDTGGALA AEGQIVQPII DRLLDQDYFV RKPPKSLDRN
DFYWLLEAVC ELETPDAVAT LTACAAAAVA AGVSLMPQAP SAIVLCGGGR KNNYMKQSIA
KFTSCDVTDV DALGFDGDMI EAQAFGFMAV RVLNGAPTSF PGTTGVAAPV GGGVTSGLN