Gene Dshi_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2146 
Symbol 
ID5713142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2276189 
End bp2276938 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID641268068 
Producthypothetical protein 
Protein accessionYP_001533483 
Protein GI159044689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.655352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT TGAGCCTTGC TCTCATCGCC ACGACCGCCA TGTGTAGCCC TGCCTTCGCG 
ATGAGTGGCG CAGACGAGGG CAACACAGTG TCCGAGGTCC AATCCCATGC GACAGAAGCC
GCCGAGACCG TCGAAAACGG TGCATCCGAA GTGTATGATC GGATAACCGA AGAGATCAGC
GATGCCGCCG CTGCAGTGGA AAGCGCCACG ACGTCCAGTA CGGAGCAGGC CGCAGAGGTC
GGTGGTGATG CCGCCAGCGC GGTCGAGGAC GTCTATAACT CGGCTGTCGA GACCACGAAA
AAAGCCTATG CGGAAGCAAT TGATGAAGTT GAGCACACGA AAGAAACCCT CGCCGCCCGC
GCGGAAATGG GCGAGGCGCG CGTCCTCACA CCGATCGACC TCGATAATCG GTCCGACTTC
ATCAGGGCCA GCGACATCAT CGGGGCCGAC ATCTATACCG CCCGCGCGGC GATGGAACCT
GGCGCCTGGC GAGAAGCCAC GCGCATTGCC GACGATTGGG ATAACATCGG CAACGTGGTC
GAAATGGTTG TCGGGCCGGA CGGAAACCTG CGGGGCCTTG TCGCCGAAGT GGGCGGCGTT
CTCGGGATGG GCGATGCCCA TGTCCTGATC GAGATGTCGG ACCTGCATCG CACCATGCCT
GACGATGATG GCAACTTCGC CTTCGTGACG TGGATGTCCG AGGAGGATCT GAAAAACGAG
CGCCCGGTCG AAAAGGATTG GTGGCAGTAA
 
Protein sequence
MTRLSLALIA TTAMCSPAFA MSGADEGNTV SEVQSHATEA AETVENGASE VYDRITEEIS 
DAAAAVESAT TSSTEQAAEV GGDAASAVED VYNSAVETTK KAYAEAIDEV EHTKETLAAR
AEMGEARVLT PIDLDNRSDF IRASDIIGAD IYTARAAMEP GAWREATRIA DDWDNIGNVV
EMVVGPDGNL RGLVAEVGGV LGMGDAHVLI EMSDLHRTMP DDDGNFAFVT WMSEEDLKNE
RPVEKDWWQ