Gene Dshi_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2145 
Symboleno 
ID5713141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2274839 
End bp2276113 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content64% 
IMG OID641268067 
Productphosphopyruvate hydratase 
Protein accessionYP_001533482 
Protein GI159044688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.604241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA TCGTTGATGT CTATGCTCGC GAAATTCTTG ATAGCCGGGG CAACCCGACG 
GTGGAGGTGG ACGTCACGCT CGAAGACGGC ACCCTGGGCC GGGCGGCGGT GCCGTCAGGT
GCGTCTACCG GCGCCTACGA GGCGGTCGAG CTGCGCGACA AGGACACAGC ACGGTATTTC
GGCAAAGGCG TCAAGACGGC GGTGGCCTTC GTCAATGGCG AGATCGCCGA GGCCCTGATG
GGCATCGACG CGACCGACCA GGTGGGCATC GACAGCGCGA TGATCGAACT GGACGGGACC
CCGAACAAGA GCCGCCTTGG TGCCAATGCG ATCCTGGGCG TGTCGCTGGC GGTCGCCAAG
GCTGCCGCCG AGGCCACGGG CCAGCCGCTC TATCGCTATG TGGGCGGCAC CTCGGCGCGG
GTTCTGCCGG TGCCCATGAT GAATATCATC AACGGCGGCG AGCATGCGGA CAATCCGATC
GATATCCAGG AATTCATGAT CATGCCGGTC TCGGCCGACA GCATCGCCGA GGCCGTGCGC
ATGGGCGCCG AGGTGTTCCA CACCTTGAAG AAGGAACTGT CGGCCGCGGG CCTGTCGACC
GGCATCGGCG ATGAGGGCGG CTTTGCGCCG AACCTCAGCT CCACCCGCGA TGCGCTGGAC
TTCGTGCTGA AGGCGATCGA AAAGGCCGGC TATACGCCGG GCGAAGACAT CTATCTCGCC
TTGGATTGTG CCGCGACCGA GTATTTCGAG GACGGGCGCT ACGAGATGAA GGGCGAGGGC
AAGACCCTGA CCCCCGAGGC CAATGTCGAC TACCTCGAGG CGCTGGTGAA CGACTACCCG
ATCCTGTCGA TCGAGGATGG CTGTTCCGAG GACGACTGGG AAGGTTGGGC GCTGCTGACC
GAGCGTCTGG GCGACCGGGT GCAGCTTGTG GGCGATGACC TGTTCGTCAC GAACCCTGCA
CGGCTGGCCG AGGGTATCCA GAAGGGCTGC GCCAATTCCC TGCTGGTGAA GGTCAACCAG
ATCGGCACCC TGACCGAAAC CCTTTCGGCG GTGGACCTGG CCCATCGCAA CCGGATGACT
TGCGTGATGT CGCACCGCTC CGGCGAGACC GAGGATGCCA CCATTGCCGA CCTCGCCGTG
GCCACGAATT GCGGGCAGAT CAAGACTGGC TCGCTGGCGC GCTCGGACCG GCTGGCGAAA
TACAACCAAC TCATCCGGAT CGAGGACGAA CTGGGCGAGA CGGCGATCTA CGCGGGCCGG
TCGATCCTGC GCTGA
 
Protein sequence
MSLIVDVYAR EILDSRGNPT VEVDVTLEDG TLGRAAVPSG ASTGAYEAVE LRDKDTARYF 
GKGVKTAVAF VNGEIAEALM GIDATDQVGI DSAMIELDGT PNKSRLGANA ILGVSLAVAK
AAAEATGQPL YRYVGGTSAR VLPVPMMNII NGGEHADNPI DIQEFMIMPV SADSIAEAVR
MGAEVFHTLK KELSAAGLST GIGDEGGFAP NLSSTRDALD FVLKAIEKAG YTPGEDIYLA
LDCAATEYFE DGRYEMKGEG KTLTPEANVD YLEALVNDYP ILSIEDGCSE DDWEGWALLT
ERLGDRVQLV GDDLFVTNPA RLAEGIQKGC ANSLLVKVNQ IGTLTETLSA VDLAHRNRMT
CVMSHRSGET EDATIADLAV ATNCGQIKTG SLARSDRLAK YNQLIRIEDE LGETAIYAGR
SILR