| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2140 |
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| Symbol | |
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| ID | 5713136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2269849 |
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| End bp | 2271162 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268062 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533477 |
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| Protein GI | 159044683 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.387464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCT TTCAGATCGC GTCGCTGCTG GTGGTGATCG CCGCTCTCTT CGGTGTCATC
AATCACCTGT ACCTACGCCT GCCCCCCTCG ATCGGGATCT TGCTGGTGGC GCTTGCTGCC
TCGCTCTCGG TGATGGGGAT CGACGCGCTC TTTCCGCAGA GCGTCATGCG CGAGGCCGTG
ACAGGAATGG TGGCGCGGCT GGAATTCTCC GACGCGCTGC TCGACGGGAT GCTGGGCCTG
CTGCTCTTTG CCGGGGCGCT GCATGTGAAG ATCTCGGACC TGCGCCACGA AGGCCGCATC
GTGCTGCTCA TGGCGACCCT CGGCGTGCTG ATCTCCACCG TAGTGGCGGG CGTGGGGTTC
TGGGCGCTTG CGGGCGCACC GGTGCTGATC GCGCTGGTGT TCGGGGCGTT GATCTCGCCC
ACCGACCCCG TCGCCGTTCT GGGCGTGTTG CGCTCAACGA ACATGCCCAA GAGCCTTGAG
ACCAAGATCG CGGGCGAGAG CCTGTTCAAT GACGGGGTCG GATACGTGGT GTTCCTGATC
CTCGTGGGAC TGGCCTTTCC GGCGCAGGCC CACATGGACG CGGGGTTCTT CAACGCGGTC
TTTCTGTTCG TGCGGAAGGC TGGGGGCGGG GCGCTGGTCG GGCTGGTGCT GGGCTGGCTG
ACCTTCAAGC TGATGGTTCG GGTGGACGAT TACGCGCTTG ACGTGATGCT GACCCTGGCA
CTGGCGCTCG GAGGGTATTC GCTGTCCGTG TGGCTGGGGG TATCGGCCCC GATCATGGCC
GTGGTCGCAG GGCTGATGAT CGGCGAGGTT CTGTCCGAGC ACCGCATGTC CGAGCTGACG
CGGACCCAGG TCGACATGTT CTGGCACCTG ATCGACCAGA TCCTGAACGC GATCCTCTTC
CTGATGATCG GGTTCGAGAT TTTCGCCGTC ACCTTCAGTC ACGCATCTTT CGGGCTGATC
GTCGGCGCGA TTGTCCTGTC GCTGATCGCG CGGCTCGCGG CGGTGGCAAT CCCGCTCTAC
CTCGTGCGCA GTCCCGCCGA CCTGACCCCG GAGGCGATCC CGATCATGAC CTGGGGCGGG
CTGAAGGGCG GGATTTCGGT GGCGCTGGTT CTATCCCTGC CCGAAACCGA GTGGACGCAG
GTGCTGCTGA CGGCGGTCTA TGTGGTCGTG ATCTTCTCGA TCGTGGTACA AGGTTTGACA
GTGGCGCCAT TGGCCCGGGC GCTCAGCCGA CAGGCACGGG CCGCGCAGAA GGCCGCGCGC
GCAGAGGTTG CTGGGTCGGG CACGCGGGAT ATGCAAGCAC CCCGGCAGAG GTGA
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| Protein sequence | MDFFQIASLL VVIAALFGVI NHLYLRLPPS IGILLVALAA SLSVMGIDAL FPQSVMREAV
TGMVARLEFS DALLDGMLGL LLFAGALHVK ISDLRHEGRI VLLMATLGVL ISTVVAGVGF
WALAGAPVLI ALVFGALISP TDPVAVLGVL RSTNMPKSLE TKIAGESLFN DGVGYVVFLI
LVGLAFPAQA HMDAGFFNAV FLFVRKAGGG ALVGLVLGWL TFKLMVRVDD YALDVMLTLA
LALGGYSLSV WLGVSAPIMA VVAGLMIGEV LSEHRMSELT RTQVDMFWHL IDQILNAILF
LMIGFEIFAV TFSHASFGLI VGAIVLSLIA RLAAVAIPLY LVRSPADLTP EAIPIMTWGG
LKGGISVALV LSLPETEWTQ VLLTAVYVVV IFSIVVQGLT VAPLARALSR QARAAQKAAR
AEVAGSGTRD MQAPRQR
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