| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2137 |
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| Symbol | pcm |
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| ID | 5713133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2266892 |
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| End bp | 2267542 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268059 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_001533474 |
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| Protein GI | 159044680 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.201933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.500345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCCAT CGCCGGAACA GGTCATGCAG TTCCTCTATG CTCTGCGCTC GCGCGGGGTT
CGGGACAGGG CGGTCCTGAC GGCGATGGAA AAGATCGACC GCGGCCTCTT CGTCGAAGGC
GTGTTTTCGG GCCGCGCCTA TGAGGACGTG CCCTTGCCCA TCGCCTGTGG CCAGACCATC
AGCCAGCCCT CGATCGTGGG GTTGATGACA CAGGCCGCCG AGATCGGGCC CCGCCACCAT
GTTCTCGAAG TGGGCACAGG CGCAGGCTAC CAGGCGGCGA TCCTCAGCCA ACTTGCCCGC
CGCGTGTGGA CCGTGGACCG TCACCGCCGC CTGACCCGTG CCGCCGAGGC CCGGTTCAAG
GCGCTCGATC TGACCAATGT GACGGTTCTG ACCGGTGACG GGAGCTTCGG TTTGCCCGAC
CAGGCCCCGT TCGACCGTAT CCTCGTGACC GCAGCCGCCG AAGATCCCCC CGGTCCGCTC
TTGGCGCAAC TGCGCGAGGG GGGTATCATG GTCGTGCCGG TGGGGCAGTC GGATGCGGTG
CAGAGCCTGA TCAAGGTCAC GCGAACCGAG AGCGGTTTCG ACTATGAAGA GATGCGCAGC
GTGCGGTTTG TCCCCCTGGT AGAAGGCATC GCGCCGGAGA ACAGCGCCTG A
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| Protein sequence | MSPSPEQVMQ FLYALRSRGV RDRAVLTAME KIDRGLFVEG VFSGRAYEDV PLPIACGQTI
SQPSIVGLMT QAAEIGPRHH VLEVGTGAGY QAAILSQLAR RVWTVDRHRR LTRAAEARFK
ALDLTNVTVL TGDGSFGLPD QAPFDRILVT AAAEDPPGPL LAQLREGGIM VVPVGQSDAV
QSLIKVTRTE SGFDYEEMRS VRFVPLVEGI APENSA
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