| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2126 |
|---|
| Symbol | |
|---|
| ID | 5713122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2256727 |
|---|
| End bp | 2257959 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641268048 |
|---|
| Product | creatinase |
|---|
| Protein accession | YP_001533463 |
|---|
| Protein GI | 159044669 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.525322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGTA ATACCAACGT CGACGACATG CTCCACGTCA TGGAATGGCA TAACGGCGAA
AAAGAGTTCT CGCCCTTTTC GGACACCGAG ATGGCCCGTC GGCAAAACGA ATTGCGCGAC
TGGATGGCCA AGAACGATGT CGATGCGTCG CTCTTCACCT CGTATCACTG CATCAACTAT
TACAGCGGCT GGCTGTATTG CTATTTCGGC CGTAAATACG GCATGGTCAT CGACCAGAAG
AACGCCACGA CGATCTCCGC CGGGATCGAT GGCGGCCAGC CCTTCCGCCG GAGCTTTGGC
AACAACATCA CCTACACCGA CTGGCGCCGC GACAACTTTT ATCGCGCGAT CCAGCAGCTG
ACCCCGGGCG CCAAGCGCAT CGGCATCGAG TTCGACCATG TCTCGCTCGA GTACCGCCAG
CTGCTGCAGG ATGCGCTGCC GGGCGTCGAG TTCGTCGATG TCGGCCAGCC CGCCATGTGG
ATGCGCACCA TCAAGTCCGC CGAAGAGATC AAGCTGATCA AGGAAGGCGC GCGCGTCGCC
GACGTGGGTG GCGCGGCCGT GGCCGCAGCG GTCAAGGCCG GTGTCCCCGA GCATGAAGTG
GCCATCGCCG GCACCACCGC GATGATCCGC GAGATCGCGA ACTCCTTCCC CTTCGTCGAG
CTGATGGACA CCTGGACCTG GTTCCAGTCC GGCATCAACA CCGACGGCGC CCATAACCCG
GTGACCAACA AGAAGGTGCA GTCGGGCGAG ATCCTCAGCC TCAACACCTT CCCGATGATC
TTCGGCTATT ACACCGCGCT GGAACGGACC CTGTTCTGTG ACCATGTGGA CGATGCCAGC
CTCGACATCT GGGAAAAGAA CGTGAAGGTG CACGAGCGTG GCCTGCAGCT GATCAAGCCC
GGCGCGCGCT GCATGGACAT CGCGATCGAG CTCAACGAGA TGTATCGCGA GTGGGACCTG
CTGAAGTATC GCTCCTTCGG CTACGGGCAC AGCTTCGGTG TGCTGAGCCA CTACTACGGC
CGCGAGGCGG GCGTCGAGCT CCGCGAGGAT ATCGAAACCG AGCTGAAGCC AGGGATGGTG
GTGTCCATGG AGCCGATGGT GATGATCCCC GAGGGTCAGC CGGGGGCCGG GGGCTACCGC
GAGCATGACA TCCTGGTCAT CAACGACGAC AACACGGTGG AAAACATCAC CGGGTTCCCC
TTCGGCCCCG AGCACAACAT CATCAAGAAC TGA
|
|---|
| Protein sequence | MDGNTNVDDM LHVMEWHNGE KEFSPFSDTE MARRQNELRD WMAKNDVDAS LFTSYHCINY
YSGWLYCYFG RKYGMVIDQK NATTISAGID GGQPFRRSFG NNITYTDWRR DNFYRAIQQL
TPGAKRIGIE FDHVSLEYRQ LLQDALPGVE FVDVGQPAMW MRTIKSAEEI KLIKEGARVA
DVGGAAVAAA VKAGVPEHEV AIAGTTAMIR EIANSFPFVE LMDTWTWFQS GINTDGAHNP
VTNKKVQSGE ILSLNTFPMI FGYYTALERT LFCDHVDDAS LDIWEKNVKV HERGLQLIKP
GARCMDIAIE LNEMYREWDL LKYRSFGYGH SFGVLSHYYG REAGVELRED IETELKPGMV
VSMEPMVMIP EGQPGAGGYR EHDILVINDD NTVENITGFP FGPEHNIIKN
|
|---|
| |