Gene Dshi_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2124 
Symbol 
ID5713120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2254814 
End bp2255617 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID641268046 
Producthypothetical protein 
Protein accessionYP_001533461 
Protein GI159044667 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTT CGACCGTTTT TGCTGCTGAA ATGCCCTGGC CGGACTATCA GAAACGGGTG 
CAATCGGGTG ACGTGCCCGT TCTCATCCCG CTGGGATCGA TGGAACAGCA CGGCCATCAC
ATGCCGATGC ATGTGGACGT CCTGCTGCCG ACCGAATTCG CCCGCCGCGT GGCCGAGAAG
GTCGGGGCCC TCGTCGCACC GCCCTTTACA TACGGATACA AGTCCCACCA GAAGTCCGGC
GGCGGCAACT TCTTTCCCGG CACGACGAGC CTCGATGGCG CAAGCCTCGT GAACGCGCTC
AAGGACGTGG TCAAGGAATT CGTCCGCCAC GGCGTGCGCA ACCTGTGCAT CGTCAACGGG
CATTTCGAGA ACTCCTGGTT CATCACCGAG GCGATCGACC TGGCGTTGCG CGAACTCGGC
TGGGGCGGCG TGCATGACGT CAAGATCGTC GTGCTGTCCT ATTGGGACTT CGTGGACCAG
GCCTCCATCG AGAAACTCTA TCCCAATGGG TTCCTGGGGT GGGACATCGA ACATGGCGGT
GTTCTGGAAA CATCGCTGAT GCTGCGCCTG CACCCCGATC TGGTGTCGCT GCAGGACGCG
GTGGAGCACG CGCCCGCGAC CTTCCCGCCC TATGACGTCT ACCCGGCCAA GCCCGAATGG
ACCCCGGCAA GCGGCACCCT GTCCTCTCCG AAAGAGGCGA CCGCCGAGAA GGGCGACATC
CTGCTGGAGG TCTGCACCGC GGGCATCGTC AACGCGCTGC AAACCGAGTT CGCCCTGACC
GCAGGCCCGT CCGGTAGCAA CTGA
 
Protein sequence
MPRSTVFAAE MPWPDYQKRV QSGDVPVLIP LGSMEQHGHH MPMHVDVLLP TEFARRVAEK 
VGALVAPPFT YGYKSHQKSG GGNFFPGTTS LDGASLVNAL KDVVKEFVRH GVRNLCIVNG
HFENSWFITE AIDLALRELG WGGVHDVKIV VLSYWDFVDQ ASIEKLYPNG FLGWDIEHGG
VLETSLMLRL HPDLVSLQDA VEHAPATFPP YDVYPAKPEW TPASGTLSSP KEATAEKGDI
LLEVCTAGIV NALQTEFALT AGPSGSN