Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2109 |
Symbol | |
ID | 5713105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2236892 |
End bp | 2238043 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641268032 |
Product | hypothetical protein |
Protein accession | YP_001533447 |
Protein GI | 159044653 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.456028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGTCA TGACCGACTC TCGCCTCTCC CCTCTGCCCA CGCCCTGCCT GCTGGTCGAC GAGGCCCGCA TGACGCGCAA CATCGAGCGC CTGGCGCAAC ATGCGGCGGC ACTCGGGCTC TCTTTGCGGC CGCATCTGAA AACCACCAAG AGCATCGAGG CCGCCCGCCG CGTGCTGCCC GGGGGCAATG GCCCCGCCAC GGTCTCCACC CTCGCCGAGG CCGAAGCGTT CGCCGAGGCC GGGATCACCG ATATCCTCTA CGGCGTGGGG ATCAGCCCCG ACAAGCTGGA GCGTGTGCTG GCCCTGCATC GCGCGGGCTG CCGGCTCATC GTCCTGCTCG ACTGCGCCGC CCAGGCCGAG GCGGTCGCCG CGGCGGCGCG GGCCTCCGGC ATCGCGATCC CGGCGATGAT CGAGATCGAC AGCGACGGCC ACCGCAGCGG CCTGACGGCG CAGGACCCCA CCCTGGTCGA GGTCGGCCGC ATCCTGCATG CGGGCGGCGC GGAGCTTTGC GGCGTGCTGT GCCACGCCGG GGAGAGTTAC GGCGCGGTCG GCCGCGCAGC CCAGGCGCTT TGCGCCGAAG AGGAACGCCG CGCGGTGGTC GCCGCCGCTA GCGTCCTGCG CGCGGCTGGC CTGCCCTGTC CGGTGGTCAG TGTCGGATCG ACCCCGACCG CCCATGCCGC AGAGCACCTC GACGGGGTCA CCGAATTGCG CGCGGGTGTC TACGTGTTCT TCGATCTCGT CATGGCCGGG ATCGAGGTCT GCCAGATCGA CGATATCGCG CTGAGCGTGC TGACCACGGT CATCGGGCAC CAGCCCTCGC GGGGCTGGAC GATCTGCGAT GCCGGCTGGA TGGCAATGTC GCGGGACCGG GGAACGGCGT CCCAGCGGGT CGACCAGGGC TACGGCGTGG TCTGCGATGC CGAGGGGCAG GTGATCCCGG GCTTGATCGT AATCCAGGCC AACCAGGAAC ACGGCGTGAT CGCCAAGCGC CCCGGGTTCG ACGGGCCGAT CCCCGAATTT CCCGTCGGCA CGCGGTTGCG GATCCTGCCG AACCACGCCT GTGCCACGGC GGCGCAACAC CAGAACTACC ATGTCATCCC CGACACCCCG GGCGCCGCGT TGAAGACCTG GCCCCGGTTC TCCGGCTGGT AG
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Protein sequence | MCVMTDSRLS PLPTPCLLVD EARMTRNIER LAQHAAALGL SLRPHLKTTK SIEAARRVLP GGNGPATVST LAEAEAFAEA GITDILYGVG ISPDKLERVL ALHRAGCRLI VLLDCAAQAE AVAAAARASG IAIPAMIEID SDGHRSGLTA QDPTLVEVGR ILHAGGAELC GVLCHAGESY GAVGRAAQAL CAEEERRAVV AAASVLRAAG LPCPVVSVGS TPTAHAAEHL DGVTELRAGV YVFFDLVMAG IEVCQIDDIA LSVLTTVIGH QPSRGWTICD AGWMAMSRDR GTASQRVDQG YGVVCDAEGQ VIPGLIVIQA NQEHGVIAKR PGFDGPIPEF PVGTRLRILP NHACATAAQH QNYHVIPDTP GAALKTWPRF SGW
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