| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2108 |
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| Symbol | |
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| ID | 5713104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2234212 |
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| End bp | 2236719 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268031 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533446 |
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| Protein GI | 159044652 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG TCATTGTTTC CGCGGTGATT GCATCGCTGT TTCTCGTCAT CGGTGCGGCA
GAGCCTCTTG CCGCGCGGTT GCGGCTGCCC TTCACCGTGA TCCTCGCCGT CCTCGGCATC
CTGATCGGGT CGGGCGCGAT CTTCTTTCTG CGCACGGACC TGACCGATGC CCTCAACCCG
GTGGCCGAGG CGATCCTCGG TCTGCCGATC AGCTCGAACG TGTTTCTCTA CGTCTTCCTG
CCCACGCTGC TGTTCCAGGC GACGCTGGGG ATGAACCTGC GGCGCATGCT CGACGACTGG
GTGCCGATCA TGGTGCTGGC GGTGGTCGCG GTGGTCGTGG CGACGCTGAG TGTGGGCTAC
GCGCTGTCCT GGGCCAGCAC CTTGCCGCTG GTGGCCTGCC TGCTGATCGG GGCCATCGTG
TCGACCACCG ACCCCTCGGC GGTGGTCTCG ATCTTCCGGT CGATCTCGGC CCCCCGGCGC
CTGTCGCGGA TCATCGAGGG CGAGAGCCTG CTGAACGACG CCGCGGCCAT CGCCCTGTTC
GGGCTGTTCA TGGGCTTCGT GATGATGGGG GTGCCCGATC CCAGGCTCGG CGAGGCCCTC
GGCCAGTTCC CGATTCTGAT CGCCGGAGGT GCCTTGACGG GCTGGCTCGC CGCGCAGGTG
GCGGTGTGGA TCATGGCGAT GTTCCGCGCC CACGAGTTGG CGATGATCTC GGTTTCGGTG
GCCTTGCCCT ACCTGGCCTA TATCGGCTCG GAACAGGTCG TGGGCGCCTC GGGCGTGATC
GCTGTGGTGG CCGCGGGGCT GACCCTGAAC CTGACCGGAC CCGGTCGCCT GCCGCCGCAG
GCCTGGGCCA ACCTGGGCGA GGTCTGGGAC CTGCTGGCAC ACTGGGCCGG GGCGCTGATC
TTCATCCTCG CCGCCCTGCT CATTCCGCGG CTGCTCGAAG GCGTGCGGCT GTCGGATTTC
GTCCTGCTCG GGGTGGTGAT CCTGGCGGCG CTCGCGGCCC GCGCCGTGGT GCTCTTTGGC
CTGCTGCCGC TTCTGACGCT CATGCGGGTC TCGCCCCATG TGGAACGGCC CTATCGGACC
GCGATCCTGT GGGGCGGGCT GCGCGGGGCC GTCACCCTTG CCCTTGCCCT GGCCGTCACC
GAGAGCATCT GGGTCCCCGG CGAGGTGAAA CGCCTGGTAG GTATCCTGGC CACCGGCTTC
ACCCTCTTCA CGCTGCTGGT GCAGGGCACG ACCCTGCGCG CGGTCATCGG CTGGCTCGGG
CTCGACCAAC TGTCGCCGAT CGACGAGGCG ATGTCCCGCC AGGTGATCGC GGTGTCGCTT
CAGACCGTGC GCGAGGACGT GGCGCGCACC ACCGAGGATT ACGCCCTGAC CCATGACGTG
GTCCGGGCCG AGGCGAAGGC CTTTGGCGAA CGGCTGGAAC AGGCGGTCAA GGCCGCCGAG
GACAGCGACG ATATCCTCGA TCGTGACCGG ATCACCCTGG GCCTGATCGC CCTTGCGGGG
TTCGAGCGCT ACACGATCCT GGCGCGCGTG CGCGAGCGCA CGATTTCCGC CCGCATGGCC
GAGCAGACCC TGCTCGATGC CGACCGGCTG ATCGAAGGGG CGCGGGCCGG GGGGCGCAAC
GGCTACCAGC GCGCCGCGCG CCGGTCTGTC GCCTACGGGC CGGGCTTCCG GGTGGCCGGG
CTGCTGCACC GCCGGTTCGG CCTGTCCCGC CCCCTCGTAC GGATGACCGC GGACCGGTTC
GAGCTTCTGC TGTCGCAACG CCTGACCCTG CGGGATCTCG ACGCCTTCAT CGAAGGCCGC
ATTCGGCGCA TCCACGGGCG ACGGGTTGCG GACCTGCTGC TCGAACTGCT GGCCCGGCGG
ATCGAGATGG TGGAGACCGC CCTCGACGGG CTGCGGCTGC AATACCCGGG CTACGCGGAA
GAGCTGGAGC GGCGCTTCAT CCGCCGCACC GCCCTGCGGC TGGAAGAGCG TGAATACGCC
GCCATGCGGG AGGATGGGCT GATCGGCGCC GAGGTCTTCA CCACCCTCAT GCAGGACCTT
GCCACGCGCC GGGCCCAGGC AGAGCATCGC CCGCCGCTGG ACATCGCCGT GCAGCGGCTC
GAGCTGATCC GGCAGTTCCC GCTGTTTTCG GACCTCGATG ACAAGACGTT GCGGCAATTG
TCGCGGGCGC TGAAGACCCG CTACGTGAAC GCTGGCAACA TCGCCCTGCA CAAGAACCGC
CCCGTCCGGA GCGTGTATTT CATCGCCTCT GGGGCCGTCG AAGTCGAAAG CGCGGGGCAA
ACCTGGCGGC TCGGCCGGGG CGAGATGTTC GGGCAGATCG CGATCCTGAT GAAGAAAGCG
CGCCGCGCCG AAGCCCGGGC GATTGCCCCC ACCACGCTGC TGGTCCTGGA CGTGGCGCGC
TTCAGGGCCC TGCTGAACCG CAGCGCCGCC CTGCGCGATG CCGTCCGGGC CAGCGCCGAG
AAACGCGGCC TCGATCCGAA CCAGATCCTC GCCTCCGCCG ACCCCTGA
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| Protein sequence | MDIVIVSAVI ASLFLVIGAA EPLAARLRLP FTVILAVLGI LIGSGAIFFL RTDLTDALNP
VAEAILGLPI SSNVFLYVFL PTLLFQATLG MNLRRMLDDW VPIMVLAVVA VVVATLSVGY
ALSWASTLPL VACLLIGAIV STTDPSAVVS IFRSISAPRR LSRIIEGESL LNDAAAIALF
GLFMGFVMMG VPDPRLGEAL GQFPILIAGG ALTGWLAAQV AVWIMAMFRA HELAMISVSV
ALPYLAYIGS EQVVGASGVI AVVAAGLTLN LTGPGRLPPQ AWANLGEVWD LLAHWAGALI
FILAALLIPR LLEGVRLSDF VLLGVVILAA LAARAVVLFG LLPLLTLMRV SPHVERPYRT
AILWGGLRGA VTLALALAVT ESIWVPGEVK RLVGILATGF TLFTLLVQGT TLRAVIGWLG
LDQLSPIDEA MSRQVIAVSL QTVREDVART TEDYALTHDV VRAEAKAFGE RLEQAVKAAE
DSDDILDRDR ITLGLIALAG FERYTILARV RERTISARMA EQTLLDADRL IEGARAGGRN
GYQRAARRSV AYGPGFRVAG LLHRRFGLSR PLVRMTADRF ELLLSQRLTL RDLDAFIEGR
IRRIHGRRVA DLLLELLARR IEMVETALDG LRLQYPGYAE ELERRFIRRT ALRLEEREYA
AMREDGLIGA EVFTTLMQDL ATRRAQAEHR PPLDIAVQRL ELIRQFPLFS DLDDKTLRQL
SRALKTRYVN AGNIALHKNR PVRSVYFIAS GAVEVESAGQ TWRLGRGEMF GQIAILMKKA
RRAEARAIAP TTLLVLDVAR FRALLNRSAA LRDAVRASAE KRGLDPNQIL ASADP
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