Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2105 |
Symbol | |
ID | 5713101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2230732 |
End bp | 2231412 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641268028 |
Product | hypothetical protein |
Protein accession | YP_001533443 |
Protein GI | 159044649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.351521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGGC TGACGGACCT GATAGCACAG GCCAAGGCCA AAGACGCCAC ACTTGGCAAT GAACTGGAAC GGGAGTTCCG TGCGCTGGCC AATCGCCGCG CCTTTGGGCT GAACTTTGAA CGCCATGCAC CAGAAAGCGT GGAACTGCCC GGACGGCCCA TCCGCAAGGG CGACAAGGTG CGGGTGTTGC CGCCCCGTGG CAGCACGGAC AAGGGCGACC AGCGGCTGTG GAAGGTGAAC CGGACCTACA AGCAGGATGG CAAGCGGGTA GCGGACCTGA CGCTGCACGA GGCAGCGGAG CCAGAGGCAC AGACGGTCCC GGTCGAAGAC TTGATCGTGG TGGCCGAGTT CCGCGACTAC ATCTATCCCG GTCTGGTCAG CACCGGCAAA GTCGAGCGCG GCGGCGACAA GCCCTATCAC ACGGTAATCA ATGGTGAGAA CTTCCACGCG CTAGAGGCGC TGACCTACAC CCATCGCGGC AAGATCGACG TGATCTATAT CGACCCGCCA TATAACTCGG GTGCAAGCGA CTGGAAGTAC AACAATAAAT ACGTCGGTGA TGAAGACGTC TACAGGCATT CGAAATGGTT GGCATTCATG GAAAGGCGAC TTCAAGTTGC TCGCCAGCTA TTGAAGCCTT CTGGGGCATT GACCTGCTCC CCTTTGAGTC CGCGTTTATA G
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Protein sequence | MSRLTDLIAQ AKAKDATLGN ELEREFRALA NRRAFGLNFE RHAPESVELP GRPIRKGDKV RVLPPRGSTD KGDQRLWKVN RTYKQDGKRV ADLTLHEAAE PEAQTVPVED LIVVAEFRDY IYPGLVSTGK VERGGDKPYH TVINGENFHA LEALTYTHRG KIDVIYIDPP YNSGASDWKY NNKYVGDEDV YRHSKWLAFM ERRLQVARQL LKPSGALTCS PLSPRL
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