Gene Dshi_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2105 
Symbol 
ID5713101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2230732 
End bp2231412 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID641268028 
Producthypothetical protein 
Protein accessionYP_001533443 
Protein GI159044649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.351521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGGC TGACGGACCT GATAGCACAG GCCAAGGCCA AAGACGCCAC ACTTGGCAAT 
GAACTGGAAC GGGAGTTCCG TGCGCTGGCC AATCGCCGCG CCTTTGGGCT GAACTTTGAA
CGCCATGCAC CAGAAAGCGT GGAACTGCCC GGACGGCCCA TCCGCAAGGG CGACAAGGTG
CGGGTGTTGC CGCCCCGTGG CAGCACGGAC AAGGGCGACC AGCGGCTGTG GAAGGTGAAC
CGGACCTACA AGCAGGATGG CAAGCGGGTA GCGGACCTGA CGCTGCACGA GGCAGCGGAG
CCAGAGGCAC AGACGGTCCC GGTCGAAGAC TTGATCGTGG TGGCCGAGTT CCGCGACTAC
ATCTATCCCG GTCTGGTCAG CACCGGCAAA GTCGAGCGCG GCGGCGACAA GCCCTATCAC
ACGGTAATCA ATGGTGAGAA CTTCCACGCG CTAGAGGCGC TGACCTACAC CCATCGCGGC
AAGATCGACG TGATCTATAT CGACCCGCCA TATAACTCGG GTGCAAGCGA CTGGAAGTAC
AACAATAAAT ACGTCGGTGA TGAAGACGTC TACAGGCATT CGAAATGGTT GGCATTCATG
GAAAGGCGAC TTCAAGTTGC TCGCCAGCTA TTGAAGCCTT CTGGGGCATT GACCTGCTCC
CCTTTGAGTC CGCGTTTATA G
 
Protein sequence
MSRLTDLIAQ AKAKDATLGN ELEREFRALA NRRAFGLNFE RHAPESVELP GRPIRKGDKV 
RVLPPRGSTD KGDQRLWKVN RTYKQDGKRV ADLTLHEAAE PEAQTVPVED LIVVAEFRDY
IYPGLVSTGK VERGGDKPYH TVINGENFHA LEALTYTHRG KIDVIYIDPP YNSGASDWKY
NNKYVGDEDV YRHSKWLAFM ERRLQVARQL LKPSGALTCS PLSPRL