| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2104 |
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| Symbol | |
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| ID | 5713100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2229916 |
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| End bp | 2230737 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268027 |
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| Product | putative integrase |
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| Protein accession | YP_001533442 |
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| Protein GI | 159044648 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.209867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTGGG CCATGAAGAC AAAAGGCTAC AATCAGCGCC GGGCGTGCGC GCTGGCGGGG
ATCGATCCGC GTGTGTATCG GCGTCGGTCG AAGCGCCTTG CCGACACGGA ACTGCGGGTG
AGGATGAAAG AACTGGCGTC CGAGCGGCGT CGGTTCGGTT ATCGCCGCCT GCACATGCTG
CTGAAGCGTG AGGGCTGGGA GGTAAACTGG AAGAAACTGT ACCGGCTCTA CCGCGACGAA
GGGTTAACCG TTCGTAAACG GGGCGGACGC AAGCGCGCAG TGGGCACCAG GACGCCCATG
GCGATCCCGC AGGGGCCAAA CCAGAGGTGG TCCCTCGACT TCATGTCGGA TGCGCTGGAA
GACGGGCGTC GGTTCAGGGT GCTAAACGTG ATTGATGACT TTAGCCGGGA ATGTCTGGCC
GCTGTGGTCG ATACATCCAT CAGCGGCGCA CGTGTCGCCC GCGAGTTGGA TCGGATCGCC
GAGCTGCGTG GGTACCCCTG CCTTGTGGTC AGCGACAATG GAACCGAACT GACAAGCAAC
GCGATGCTGA AATGGCAGGA AGACCGTAAA GTCGACTGGC ACTACATCGC GCCCGGAAAG
CCCATGCAGA ATGGCCTCGT CGAAAGCTTC AACGGGAGGA TGCGAGAGGA ATGCCTGAAC
GAACACCTGT TCCCGTCACT GCGCCATGCC TGCCGCATGA TTGCGGCATG GCGCGACGAC
TACAACCACC ACCGCCCGCA CTCGAGTCTC GACGGGCTCA CCCCGCGGGA GTATCACCAA
CGGTCAAGAG AGGACCAAAC CCTGAACAGA GCTAACCTAT AA
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| Protein sequence | MDWAMKTKGY NQRRACALAG IDPRVYRRRS KRLADTELRV RMKELASERR RFGYRRLHML
LKREGWEVNW KKLYRLYRDE GLTVRKRGGR KRAVGTRTPM AIPQGPNQRW SLDFMSDALE
DGRRFRVLNV IDDFSRECLA AVVDTSISGA RVARELDRIA ELRGYPCLVV SDNGTELTSN
AMLKWQEDRK VDWHYIAPGK PMQNGLVESF NGRMREECLN EHLFPSLRHA CRMIAAWRDD
YNHHRPHSSL DGLTPREYHQ RSREDQTLNR ANL
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