| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2090 |
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| Symbol | |
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| ID | 5713085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2214205 |
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| End bp | 2215461 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268012 |
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| Product | putative serine--glyoxylate aminotransferase |
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| Protein accession | YP_001533428 |
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| Protein GI | 159044634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.71592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC CGAAAAATCC CGTTAAAACT CCTGCGAAAA GCCCCTCGGT CAGCCTTGCC
AACGGGCGCC CCTATCTTGC CATTCCCGGG CCCTCGGTCA TTCCGGACCG GGTGTTGAAG
GCGATGCACC GGCCCGCGCC CAACATCTAT ACCGGGGAGC TGGTCGAGAT GGTTCACGGG
ATGGTGCCGG ACCTGAAGGC GGTGGCGCGG TGTTCGGGGG ACGTGGCGCT GTATGTCGCC
AACGGGCACG GGGTCTGGGA GGCCGCGCTG GCCAATACCT GCGCGCGGGG CGACCGGGTT
CTGGTGGTGG CCACGGGGAT GTTCGCGCGC AACTGGGCAA ACATGGCGAC GGGGCTGGGC
CTGGCGGTCG AGATCCTGGA TTTCGGGGAT CGGGGGACGT TCGATCCAGG CCTCGTGGAG
GCGACCCTGC GCAGCGACAC CCAAGGCACG ATCAAGGCGG TGATGGCGGT GCAGGTGGAT
ACCGCGACCT CGGTGCGCAA CGACATCGCG GCCCTGCGCG CGGCGATGGA TGCCTCGGGG
CACGGGGCGT TGTTGATGGT GGATTGCATC GCGTGCCTGG CCTGCGACGA CTTCCGCATG
GACGAGTGGG GCGTCGACGT GATGATGACC GGCTGCCAGA AGGGGCTGAT GACGCCGCCG
GGCATGGGGT TCGTTTATTT CAACGAGAAG GCGTCGGAGG CGCGGGCGCG GCTGGAGCTG
GTCAGCCCCT ATTGGGACTG GACCACGCGG GTCTCGCCCG AGGCGTTCTA CCAGTATTTC
TACGGCACCG CACCGACGCA TCACTTGTAC GGCTTGCGCG AGGCGCTGAC GATGATCCTG
CACGAGGAGG GGTTGGAGCC GGTTCTGGCG CGTCATGCCG CCCTGGCGCG CGCTGTCTGG
GCGGCGCTGG AGGCCTGGGG GCAGGGGCCG GGGGCGGGGC ATGTCGAGAT GAACGTCGCC
GATCCGGCCT TGCGGAGCCA TGCGGTCACC TGTGTGCGGA TGCAGGCGCC CCATGCGACG
GCCCTGCGCG ACTGGGTGAC CGCGCATGCG GGCCTGACCC TGGGCATCGG GTTGGGGATG
GCGCCGCCGG GCGATCCGGC CTGGCACGGG TTTTTCCGTA TCGGGCACAT GGGCCATGTG
AACGCGCATA TGGTGCTGGG CGCACTTGGG GCGGTCGATG CGGGCCTGAA GGCGCTGGGC
ATCCCCCACG GCCCGGGCGC GCTGGAGGCG GCGGCAGGGG TGGTGGCCGA GGCTTAG
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| Protein sequence | MSPPKNPVKT PAKSPSVSLA NGRPYLAIPG PSVIPDRVLK AMHRPAPNIY TGELVEMVHG
MVPDLKAVAR CSGDVALYVA NGHGVWEAAL ANTCARGDRV LVVATGMFAR NWANMATGLG
LAVEILDFGD RGTFDPGLVE ATLRSDTQGT IKAVMAVQVD TATSVRNDIA ALRAAMDASG
HGALLMVDCI ACLACDDFRM DEWGVDVMMT GCQKGLMTPP GMGFVYFNEK ASEARARLEL
VSPYWDWTTR VSPEAFYQYF YGTAPTHHLY GLREALTMIL HEEGLEPVLA RHAALARAVW
AALEAWGQGP GAGHVEMNVA DPALRSHAVT CVRMQAPHAT ALRDWVTAHA GLTLGIGLGM
APPGDPAWHG FFRIGHMGHV NAHMVLGALG AVDAGLKALG IPHGPGALEA AAGVVAEA
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