| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2085 |
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| Symbol | |
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| ID | 5713080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2205559 |
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| End bp | 2206308 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268007 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533423 |
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| Protein GI | 159044629 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCC TGTTCTGCAC TTGCGCCGCG CTGGCGCTTG CTCCCGCCAT GGTATCGGCG
GCCACCCTTG TGACGCTGAC CGATCCCGTC GGCGACAAGC TCTTCAATGT CGAAACCAAG
GTCGATCAGA CACCCAGTTC CGGCAAAACC GGCGGCAAGG ACGTCTTCGT GCGCTCGGAC
GAGCACACGG GGGACGACAA CGACTCGCAG GACGTCACCT GGGTGAACGG CCAGACATAC
AACTGGACGC TGGGTTACAA CTCCACCACC GGCATCCTGG ATTATACGGT GAGCGACGGG
ACCGGGCTCA TCACCTCGTC CAATGACGTG CTGATCGGGG ATCTGGGCGC GGTGAAGCTT
GTGGCCAAGG CGCTGAACCG GGAAGACACC AAGCGGGGTC GCGGGTTCAT CTTCGACGAA
ACCAACCCCA CCGGCACGTC GGTAGATATC TCGGTGACCG AGGCCAATGG CATGGCCCAG
TCCGTCTCGA TCTTCGACGA CCTGAGCAAT TCCGGCGAAA CCGGCGTCAT TTTCGCGCTC
GACAGCGGCG AACCGATCAC CTCGCTGTCG GGGACCTTCG TGTTCGACTG GGATGCAGGC
GCCTGGGACA AGTCGCCGAA TGGCCGTCTG GCCTTCCTGG TGAAGGGCTA CGAGGCCACC
GCGCCCGTGC CGCTGCCGGC GAGCGTTCTG CTGCTGGGCG CCGGGATCGC GGGTCTCGGC
CTGGCCCGGC GCAAGCGCCG CGCCGCTTAA
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| Protein sequence | MKILFCTCAA LALAPAMVSA ATLVTLTDPV GDKLFNVETK VDQTPSSGKT GGKDVFVRSD
EHTGDDNDSQ DVTWVNGQTY NWTLGYNSTT GILDYTVSDG TGLITSSNDV LIGDLGAVKL
VAKALNREDT KRGRGFIFDE TNPTGTSVDI SVTEANGMAQ SVSIFDDLSN SGETGVIFAL
DSGEPITSLS GTFVFDWDAG AWDKSPNGRL AFLVKGYEAT APVPLPASVL LLGAGIAGLG
LARRKRRAA
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