Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2084 |
Symbol | |
ID | 5713079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2204080 |
End bp | 2205153 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641268006 |
Product | hypothetical protein |
Protein accession | YP_001533422 |
Protein GI | 159044628 |
COG category | [S] Function unknown |
COG ID | [COG3673] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCCC CTTCCGTCCA TACCCCCACC GACCACATCG TCATTCTCGA TGGGACGATG TCGTCGCTCA TGCCCGGGCG GGAGACGAAT GCGGGGCTGG CCTACAAGCT GATCCGGGAC CGGCGGGACC CCCATGTCAC CCTGTTCTAC GAGCCCGGCA TCCAGTGGCA GGGCTGGCGC CGCAGCATCG AGGTGATCGC GGGGATCGGC ATCAACCGGC AGATCCGCCG GGCCTACCGG TTTCTCGCCC ATCGCTACCG GCCCGGGGAT CGGATCTTCC TGCTGGGCTA TTCGCGGGGG GCCTATGCGG TGCGGTCGCT GGCCGGGGTG ATCGACCAAA TGGGCCTGCT GCGCCCGGAG GCGGCGACCG ATGCCCGGGT GGGCCAGCTC TATCGCTATT ACCAGGAGCG GCGGGGCAGC CGTTGGGCGG CGAAATTCGC TGCCCGCTAT TGCCACCGGG ACGTGCCGAT CGAGATGATC GGGGCCTGGG ATACGGTCAA GGCGCTGGGC ATCCGCGCGC CGGTTCTGTG GCGGCTGGCC CCCATGGCGA CCGAGTTCCA TTCCGACCAG CTGAGCGCGT CGGTCAGGCA CGGGTTCCAC GCGCTGGCGC TGAACGAGCG GCGGTTGGCT TTCGCGCCGG TGCTGTGGAC CTGTCCGCCA GGCTGGAACG GGCATGTGGA GCAGGTCTGG TTCCGCGGCA CCCATGGCGA TATCGGCGGG CAGCTTGCGG GCTTTGCCCC GGCGCGTCCG CTGGCGAATA TTCCGCTGGT CTGGATACTG GAGCAGGCGG AGAGTTGCGG GCTGCGCCTG CCGGACCGGT GGCAGGACCG GTTCCCGCGC GACGCCGCGG CGCCCTCGAT GGGGTCCTGG CGGCGTTGGG GTAAGCTGTT CTTGCTGCGC GGCGCGCGCA AGGTCGGTTT GGACCGGTCC GAGAGCCTGC ACGAGTCGGT TCCCCGCATT CCGAAGATCC CGTTTCTGCG GCGCGCGACG CAAGGGCTGT GGACCATGCC GCGGGGGGAT CTTCCGCGGC TGCGTGCCCG GCTGCGCCTT CCGCGGCGTG GCGCCCGGTC CTGA
|
Protein sequence | MAAPSVHTPT DHIVILDGTM SSLMPGRETN AGLAYKLIRD RRDPHVTLFY EPGIQWQGWR RSIEVIAGIG INRQIRRAYR FLAHRYRPGD RIFLLGYSRG AYAVRSLAGV IDQMGLLRPE AATDARVGQL YRYYQERRGS RWAAKFAARY CHRDVPIEMI GAWDTVKALG IRAPVLWRLA PMATEFHSDQ LSASVRHGFH ALALNERRLA FAPVLWTCPP GWNGHVEQVW FRGTHGDIGG QLAGFAPARP LANIPLVWIL EQAESCGLRL PDRWQDRFPR DAAAPSMGSW RRWGKLFLLR GARKVGLDRS ESLHESVPRI PKIPFLRRAT QGLWTMPRGD LPRLRARLRL PRRGARS
|
| |