| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2080 |
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| Symbol | metF |
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| ID | 5713075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2200594 |
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| End bp | 2201463 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268002 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001533418 |
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| Protein GI | 159044624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CGCGCGTGTC TTTCGAATTC TTCCCGCCCC AGTCCATCGC AGCCTCCTTC
CGGCTGTGGG ATACGGTCCG GACCCTTGCT CCGCTCGACC CGAGCTTCGT CTCCGTCACC
TACGGTGCGG GGGGCACGAC CCGCAAGCTG ACCCATGACG CGGTGGCCAC GATCGGGCAG
AACTACGGGC TGAACGTGGC CGCGCACCTG ACCTGCGTCG AGGCGACCCG CGCCGAGACC
CTGGAGATCG CCGAGGGCTA CGCCGCGGCG GGTGTGACCG AGATCGTCGC CCTGCGCGGC
GACCCGCCCA AGGGTGCCGA CCGCTTCACC GCGGCCCAAG ACGGCTTTGC CAGCTCGGTC
GAGCTGATCG AGGCGCTGGC CGCCACGGGC AAGTTCACCC TGCGCGTGGG GGCCTACCCG
GACCAACACC CGGAAGCCGC GAGTGCCGAC GCGGATGTCG ACTACCTCAA GCGCAAGATC
GACGCGGGCG CCCACTCGGC GATCACCCAG TTCTTCTTCG AGGCCGAGAC GTTCTTCCGC
TTCCGCGATC GCTGCGCCAA GGCGGGGATC GACGCGCCCA TCATCCCGGG CATCATCCCG
ATCGAGAATT GGACACGGGC GCGCCAGTTC GCCCTGCGCT GCGGCACCAA GGTGCCCGCC
TGGCTCGACG AGGCTTATGC CGCGGCCATC CGGGATGGTC GCGAGGACCT TCTGTCCATC
GCATTGACCA CCGAGCTGTG CACCGAGTTG CGCGAGGGCG GGGTCGAGGA CCTGCATTTC
TACACGCTCA ACAAGCCCGA ATTGACCCGG GAGGTCTGCG CGGCCCTCGG CGTGACGCCC
AAGGCCGGGC TCGCCGAAGT CGCGGCCTGA
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| Protein sequence | MSAPRVSFEF FPPQSIAASF RLWDTVRTLA PLDPSFVSVT YGAGGTTRKL THDAVATIGQ
NYGLNVAAHL TCVEATRAET LEIAEGYAAA GVTEIVALRG DPPKGADRFT AAQDGFASSV
ELIEALAATG KFTLRVGAYP DQHPEAASAD ADVDYLKRKI DAGAHSAITQ FFFEAETFFR
FRDRCAKAGI DAPIIPGIIP IENWTRARQF ALRCGTKVPA WLDEAYAAAI RDGREDLLSI
ALTTELCTEL REGGVEDLHF YTLNKPELTR EVCAALGVTP KAGLAEVAA
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