| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2079 |
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| Symbol | |
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| ID | 5713074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2199565 |
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| End bp | 2200521 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268001 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001533417 |
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| Protein GI | 159044623 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.676959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA AGGCGGCTCA GGTCATGCAT CTGGAATTTC GACATCTGCG CACGGTCAAG
GCGATCCACG AGGCCGGAGG TCTGGCCAAG GCGGCCGATC AGCTCAACAT CACGCAATCG
GCCTTGTCCC ATCAGATCAA GGGGTTGGAG GACCAGGCGG GGCTGGAGCT GTTCGTGCGC
CGCTCCAAGC CGCTGAAGCT GTCGGCGGCG GGCATGCGGC TGTTGCGGCT GGCCGAGCAG
GTGCTGCCCC AGGTCGCCGC GCTGGAGGAA GAGTTCCGCG GGATCAAGGC GGGCAAGACC
GGGCGGCTGC ATATCGCCAT CGAATGCCAC GCCTGTTACG AGTGGCTGTT TCCGGTGCTG
GAGCAGTTCC GCAAGGCCTG GCCGGACGTG GATGTGGACA TCCGCCCGGG GCTGCAATTC
CAGGCGCTGC CCGCCTTGCA GCGCGAAGAG GTGGACCTGG TGATCTCGTC GGATCCGGAA
GAGTTGCCGG GCGTCGATTT CACCCCGCTC TTCGACTACG AGCCCGTGTT CGTCGCGTCC
GCCGCCCATC CGCTGGCGGC CAAACCCTTT GTCGAGGCAG AGGATTTCCG CGACGAGCTG
CTGATCACCT ACCCGGTGGA TCGCGCCCGG CTCGACGTGT TCTCCGAACT GCTGATCCCG
GCGCGGATCG AGCCGCGCGC GGTCCGGCAG GTGGAGCTGA CGGCGGTGAT CCTTCTGCTG
GTGGCGTCCA ATCGGGGGGT CGCGGTGCTG CCCGACTGGG TGGTGCGGGA GGTGCGCTAC
AATTCGGACT ATGTCACGCG GCCGCTGACG GAGAGCGGCG TGACCAAGCG GCTCTATGCG
GCCACGCGCG ACACCGAGAC CACGCTGCCC TTCATGTCCC ATGTCATCCG GCTGGCGAGA
ACCGAGCCGA TCAAGCTGCA ACGGTCCGGG ACCGCCGAAG AACCGCAAAG CGCCTGA
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| Protein sequence | MNMKAAQVMH LEFRHLRTVK AIHEAGGLAK AADQLNITQS ALSHQIKGLE DQAGLELFVR
RSKPLKLSAA GMRLLRLAEQ VLPQVAALEE EFRGIKAGKT GRLHIAIECH ACYEWLFPVL
EQFRKAWPDV DVDIRPGLQF QALPALQREE VDLVISSDPE ELPGVDFTPL FDYEPVFVAS
AAHPLAAKPF VEAEDFRDEL LITYPVDRAR LDVFSELLIP ARIEPRAVRQ VELTAVILLL
VASNRGVAVL PDWVVREVRY NSDYVTRPLT ESGVTKRLYA ATRDTETTLP FMSHVIRLAR
TEPIKLQRSG TAEEPQSA
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