Gene Dshi_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2077 
Symbol 
ID5713072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2197642 
End bp2198481 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID641267999 
Producthypothetical protein 
Protein accessionYP_001533415 
Protein GI159044621 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCA TCTCTCTTTT CGCCGCCGCT CTCGCTGCCA TGGGGCTTGC CGCCCCGGCA 
GAGGCCCAGG CCCGCAAGCC CAGCCATTGC ATCGCCATCG CGGATGCTGC GCCGGGGATC
GAGTACATTC AGAAGGCCAG TTTCGGACAG CCCCTGCAGG AGTTCACCGT GCGGCTGAGC
TATATCGCCC ATGCCAGCTT CCTGCTGGAG GGGCCGGAGG GCTTCTCGGC GGTCACCGAT
TACACCGGGT TTCTGGGCAA CACGGATTTC TTTCCCGATG TGGTCACGAT GAACAACGCC
CATTCGACCC ATTGGACCGA CACCCCGGAC CCGCGCATTC CCCACGTTTT GCCCGGATGG
AACCCCAACG GCGCCAATCC GATCGAGCAT TACCTGGAAC TGGGCGAGGT GCTTGTGCGG
AATGTGCCCA CGGATGTGCG CTCGGGCTTC GGCACGGTGA GCGCGCCCCT GGGCAACTCG
ATCTTCGTGT TCGAAATTGC AGGGCTCTGC ATCGGGCATC TGGGGCACCT GCATCACGCG
CTCAACGATC GGCAATTCGC GGCGCTGGGC CGGCTCGACG TGGTGATGGC ACCGGTCGAC
GGCGGCTATA CGGTGCCGCA GGAGGTGATG ATCGACCTGC TCAAGCGGCT GCGGTCCTCG
GTCATCATTC CGATGCACTG GTTCGGGGAC TTCACCCTGG AGAAGTTCCT GGACGGCATG
GCCGATGAGT TCCGCATCGA CCGGCGGGAG GAGAATTTCA TCGAGGTCTC GCTCCGCAGC
CTGCCGTCGG AGCCGACGGT GGTGGTGCTG CGCCCGGCCT GGCTGCGCGA CGACGGCTGA
 
Protein sequence
MRCISLFAAA LAAMGLAAPA EAQARKPSHC IAIADAAPGI EYIQKASFGQ PLQEFTVRLS 
YIAHASFLLE GPEGFSAVTD YTGFLGNTDF FPDVVTMNNA HSTHWTDTPD PRIPHVLPGW
NPNGANPIEH YLELGEVLVR NVPTDVRSGF GTVSAPLGNS IFVFEIAGLC IGHLGHLHHA
LNDRQFAALG RLDVVMAPVD GGYTVPQEVM IDLLKRLRSS VIIPMHWFGD FTLEKFLDGM
ADEFRIDRRE ENFIEVSLRS LPSEPTVVVL RPAWLRDDG