Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2072 |
Symbol | |
ID | 5713067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2191605 |
End bp | 2193176 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267994 |
Product | putative Gluconate 2-dehydrogenase flavoprotein |
Protein accession | YP_001533410 |
Protein GI | 159044616 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA CGTTCGATCT GAACGACGAC TCTGTCGTCG TGGTTATCGG CACCGGCGCG GGGGGCGGAA CGCTCGCCAA TGAGCTGGCG CAAAAAGGTG TGAAAGTGGT CTCGCTGGAG GCGGGCGCGT TCCACGAACC GCAGGACTTC CTGCAGGATG AGTGGGCGAG CTTTGGCCAG TTGGCCTGGC TGGATGCGCG CACGACCTCC GGCGACTGGC GGGTCAGCCG GGATTTCTCC GGGTTGCCCG CATGGATCGT GAAATCCGTC GGCGGCTCTG CGGTGCACTG GGCGGGCGCG AGCCTGCGGT TCCAGGAGCA TGAATGGAAG GCGCGCACGA CCTATGGCAA CGTGCCCGGC GCGTCCCTGC TGGACTGGCC GATCGATGCC TCGGAGATGG ATCCGTGGTA CACCGCGGCC GAAGACAAGA TGCACGTCAC CCGCACCGGG GATCGGCCCG GCCTGCCCGG CAACAACAAC TACAAGGTGT TCGAAGCGGG CGCCAAGGCG CTCGGCTACA AGGACGTGCA CACCGGCCGG ATGGCCATCA AGAGTTCAAC CAACGCGGAC GGCACCCCGT GCCAGCAGAT GGGCTTCTGT TTCCAGGGCT GCAAGGTCGC GGCCAAGTGG TCGCCCAGCT ATGACGAAAT CCCGCGCGCA CTGGATACCG GCAATTACGA ACTGCGCACC CAGGCCCATG TTCTGAAGAT CGAGCATGAC GACACGGGCA AGGTCACCGG CGTGCTCTAC GCGGATGCGG ACGGCAACCA GCATTTGCAA AAGGCGCGCG TGGTGGCCGT GGCGGGCAAC TCGATCGAAA GCCCACGGCT CCTGCTGAAC TCCGCCTCGT CCATGTTCCC CGATGGGTTG GCGAACTCGT CTGGCCAGGT CGGGCGCAAC TATATGCGCC ACATGACGGC CTCGGTCTAT GCGACCTTCG ACAAACCGGT GAAGATGTGG CGCGGCACGA CCATGGCCGG GATCATCACC GACGAGGCCC GGCACGACCC GTCCCGCGGC TTTGTCGGCG GCTACGAGAT GGAGACGCTC AGCCTCGGCC TGCCCTTCAT GGCCGCCTTC CTCGACCCCG GCGCCTGGGG GCGGGAATTC ACCTCCGCGC TCGATGCCTA TGAGAACATG GCGGGCATGT GGCTCGTGGG CGAGGACATG CCCCAGGAGA CCAACCGGGT CACGCTCAAT ACCGATGTTC TGGACCAGTA CGGGCTGCCG GCACCGAACG TGCATTTCGA CGACCACCCC AACGATATCG CCATGCGCAA CCACGCCTGG CAACAGGGGC AGGCGATCTA CGAGGCGGTG GGGGCGACCC GCACCTTCCC GACGCCGCCC TATCCCAGCA CGCACAACCT CGGCACCAAC CGGATGTCCG AGAATGCGCG CGATGGGGTG GTGAACAAAT GGGGGCAAAC CCACGACATC CCCAACCTGT TCATCTCGGA CGGCTCGCAG TTCACGACCG GCGCGGCAGA GAACCCGACC CTGACCATCG TGGCGCTGGC CATGCGGCAG GCAGACCACA TTGCCCGGGA GATGACGGCC CAAAACCTCT GA
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Protein sequence | MATTFDLNDD SVVVVIGTGA GGGTLANELA QKGVKVVSLE AGAFHEPQDF LQDEWASFGQ LAWLDARTTS GDWRVSRDFS GLPAWIVKSV GGSAVHWAGA SLRFQEHEWK ARTTYGNVPG ASLLDWPIDA SEMDPWYTAA EDKMHVTRTG DRPGLPGNNN YKVFEAGAKA LGYKDVHTGR MAIKSSTNAD GTPCQQMGFC FQGCKVAAKW SPSYDEIPRA LDTGNYELRT QAHVLKIEHD DTGKVTGVLY ADADGNQHLQ KARVVAVAGN SIESPRLLLN SASSMFPDGL ANSSGQVGRN YMRHMTASVY ATFDKPVKMW RGTTMAGIIT DEARHDPSRG FVGGYEMETL SLGLPFMAAF LDPGAWGREF TSALDAYENM AGMWLVGEDM PQETNRVTLN TDVLDQYGLP APNVHFDDHP NDIAMRNHAW QQGQAIYEAV GATRTFPTPP YPSTHNLGTN RMSENARDGV VNKWGQTHDI PNLFISDGSQ FTTGAAENPT LTIVALAMRQ ADHIAREMTA QNL
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