| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2065 |
|---|
| Symbol | |
|---|
| ID | 5713060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2186415 |
|---|
| End bp | 2187020 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641267987 |
|---|
| Product | conserved hypothetical FMN binding protein |
|---|
| Protein accession | YP_001533403 |
|---|
| Protein GI | 159044609 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.111591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTACC GCCCCGAAGA GGGACACGGG CTGCCCCACA ATCCGTTCAA CGCCATCGTC
GCGCCGCGCC CTATCGGCTG GATTTCCAGC CGCGGCGCGG ACGGGCAGGA CAACCTCGCC
CCCTACTCCT TCTTCAACGC CGTGGCTTAC GTACCGCCGC AGGTGATGTT CGCCTCGACC
TCCGCCAAGG AGGATCGCGG CGACACCAAG GACAGCGTGG CAAATATCCG CGAAACCGGC
GTGTTCTGTG TGAACATCGT CTCCTATGCC TTGCGCGACG TGATGAATGT CAGCTCCGGC
AGCTACCCTG CGGAAGTGGA CGAGTTCGCC CGCGCGGGCA TCGAGAAGGC GCCGTGCGAG
ACCATCGACT GCGCCCGCGT GGCCGCAGCC CCCGCCAACC TGGAATGCAG GCTCACGCAG
ATCGTGCAAC TGGAGGGCCC ATCGAATTTC GTGGTCTTCG GTCAGGTCAC GGGCATCCAC
ATGCGCGACG AGCACCTGGT CGACGGGCGG TTCGACGTGA CCACTTTCCG GCCGCTGTCG
CGGCTCGGCT ACAGGGACTA TGCCTGCGTC GACAATCTGT TCTCGCTGGC GCGCCCGGAC
GACTGA
|
|---|
| Protein sequence | MFYRPEEGHG LPHNPFNAIV APRPIGWISS RGADGQDNLA PYSFFNAVAY VPPQVMFAST
SAKEDRGDTK DSVANIRETG VFCVNIVSYA LRDVMNVSSG SYPAEVDEFA RAGIEKAPCE
TIDCARVAAA PANLECRLTQ IVQLEGPSNF VVFGQVTGIH MRDEHLVDGR FDVTTFRPLS
RLGYRDYACV DNLFSLARPD D
|
|---|
| |