| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2061 |
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| Symbol | lysC |
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| ID | 5713056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2181413 |
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| End bp | 2182651 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267983 |
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| Product | aspartokinase |
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| Protein accession | YP_001533399 |
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| Protein GI | 159044605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.227299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTC TGGTGATGAA ATTCGGCGGC ACCTCCGTTG CCGATCTCGA CAAGATCAAG
AACGCCGCCG AGAAGGTGCA GCGCGAGGTT GCCCGCGGTC ACAAGGTGAT CGTGATCGTC
TCGGCCATGT CCGGCAAGAC AAACGAACTG GTCGGCTGGG TGGGCAAGAC ATCGCCGCTC
TACGACGCCC GCGAATACGA CGCCGTGGTC TCCTCGGGCG AGAACGTCAC CGCGGGCCTG
CTGGCGCTCA CCTTGCAGGA GATGGAAATC CCCGCCCGCT CCTGGCAGGG TTGGCAGGTG
CCCCTGCGCA CCAATTCCGC CCATGCCGCT GCCCGGATCG AGGAAATCCC CCGCGCCAAT
CTCGACGCGA AGTTCGACGA GGGCATGCAG GTGGCCGTGA TCGCGGGCTT CCAGGGGATC
AGCCCCGAGG GCCGCATCAC CACCCTGGGC CGGGGTGGGT CCGACACCAC CGCCGTGGCC
TTCGCCGCCG CCTTCGGCGC GGTGCGTTGC GACATCTACA CGGATGTGGA CGGGGTCTAC
ACCACCGACC CCCGGATCGA GGACAAGGCC CGCAAGCTGG ACCGCATCGC CTATGAGGAA
ATGCTCGAGC TGGCCTCGCT CGGCGCCAAG GTCCTGCAAA CACGCTCGGT CGAGCTGGCC
ATGCGCTTCA AGGTCCCCCT GCGGGTACTG TCGAGCTTCG AGGAAAATAC CGACACGTCA
GGCACGCTGG TCTGCGATGA GGATGAGATT ATGGAAAGCA ATGTTGTCTC CGGCGTCGCC
TATTCCCGCG ACGAGGCGAA AATGACCCTG ATCTCCGTGG CCGACCGGCC CGGGATCGCT
GCCGCCATCT TCGGGCCGTT GTCCGAGGCC GGGGTGAACG TGGACATGAT CGTCCAGAAC
ATCTCCGAGG ACGGGCGGAC AGACATGACG TTCTCGTGCC CCACAGACCA GGTGTTGCGG
GCCGAACGGG CGATCAAGGA AGCAAAGGAA CTGGGCGAGA TCAACTTCCA GGAACTCGTG
GCCGACACGG ATGTGGCAAA GGTCTCGGTC GTCGGCATCG GAATGCGCAG CCACGCCGGC
GTGGCGGCGC GCATGTTCCA GGCCCTGCGC GACGAGGGGA TCAACATCCG CGTCATCACC
ACCTCCGAGA TCAAGATCTC GGTGCTGATC GAGCGCAAGT ACATGGAACT GGCCGTGCAG
GCCCTGCACG ACGCATTCGA ACTGGACCGC GCAGCTTGA
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| Protein sequence | MSILVMKFGG TSVADLDKIK NAAEKVQREV ARGHKVIVIV SAMSGKTNEL VGWVGKTSPL
YDAREYDAVV SSGENVTAGL LALTLQEMEI PARSWQGWQV PLRTNSAHAA ARIEEIPRAN
LDAKFDEGMQ VAVIAGFQGI SPEGRITTLG RGGSDTTAVA FAAAFGAVRC DIYTDVDGVY
TTDPRIEDKA RKLDRIAYEE MLELASLGAK VLQTRSVELA MRFKVPLRVL SSFEENTDTS
GTLVCDEDEI MESNVVSGVA YSRDEAKMTL ISVADRPGIA AAIFGPLSEA GVNVDMIVQN
ISEDGRTDMT FSCPTDQVLR AERAIKEAKE LGEINFQELV ADTDVAKVSV VGIGMRSHAG
VAARMFQALR DEGINIRVIT TSEIKISVLI ERKYMELAVQ ALHDAFELDR AA
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