| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2050 |
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| Symbol | |
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| ID | 5713045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2170309 |
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| End bp | 2171463 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267972 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533388 |
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| Protein GI | 159044594 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.449343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCAA CGGATGCCGC AGAATATGCA GAAGGACGCG GGGTCGATGC GCGCCCCGCG
CCCGACTTGC GCTTGTCGCA GGATGAAGCC GGGGTCGCAG GCGCGCTGAG TGGCGATCTG
ACGATCTACG GGGTGGCCGA TCTGCAGCGG CAGCTTGCCG CGCGCCCGGC CGGGTCGCTG
ACCCTGGATC TGTCCGGCAT CGGGCGGATC GATACGGCGG GCGCCTGGCT GCTGGCAGAA
CTGGCGCGGG GCGAGGGGGT CCGCCTTGTG GGGGCGCCCG ACAAGGTGGC GCGGCTGATC
GCCAACGTGG CCAAGGCCGA GCCCGAACAC CCGGAGCGGA CAGAGACGCC GCCGACCCTG
ACCGATCGCT TGGAGCGGCT CGGGCGGCAG GTGGTGGAGG GGACGAAATT CCTCGGCGGG
CTGACCGGGA TGCTGGGCCT CGTGCTGGCC CGGTTCGGTC GGGCCCTGCG GCATCCGCGG
GAGTTCCGGA TGACCGCGCT GGTGCATCAT TGCGAGGAGG TGGGGCTCAG GGCCGTGCCC
ATCGTGGCGC TGATGGCCTT TCTGATCGGT ATCGTTCTTG CCTTCCAGGG CGCGAGCCAG
CTGCGGCAAT TCGGGGCCGA GGTCTTCGTC GTCGACCTGA TCTCGATCTC GATTCTGCGA
GAGCTTGGCA TTCTGCTGAC GGCGATCATC GTGGCCGGGC GGACGGCCTC ATCGTTTACC
GCGGCCATCG GGTCGATGAA GATGCGCGAA GAGATCGATG CGATGCGGAC GCTGGGCCTC
GACCCCGCGA TGCTGCTGTT CCTGCCGCGG GTACTGGCGC TGCTGATCAT GTTGCCGATC
CTGGGGCTGA TCGCCAACCT GTCGGGGTTG CTGGGCGGGG CGCTGATGTC CTGGATCGAG
CTGGGCATCT CGCCCGCGAT GTTCCAGACC CGGCTGATCG AGGGGACCGA TATCAATCAT
GCGGTGGTCG GGCTCGTCAA GGCGCCGTTC TTCGCCATCC TGATCGGGGT GGTTGGCTGT
CATGCGGGGA TGCAGGTGGA GGGCAACGCC GAATCCCTTG GCCGGATGAC CTCGGGTGCG
GTGGTGACCG CGATCTTCGC CGTGATCGTG ACCGATGCGG CGTTTTCGAT TTTCTTTGCG
CAGATGGGGA TCTGA
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| Protein sequence | MAATDAAEYA EGRGVDARPA PDLRLSQDEA GVAGALSGDL TIYGVADLQR QLAARPAGSL
TLDLSGIGRI DTAGAWLLAE LARGEGVRLV GAPDKVARLI ANVAKAEPEH PERTETPPTL
TDRLERLGRQ VVEGTKFLGG LTGMLGLVLA RFGRALRHPR EFRMTALVHH CEEVGLRAVP
IVALMAFLIG IVLAFQGASQ LRQFGAEVFV VDLISISILR ELGILLTAII VAGRTASSFT
AAIGSMKMRE EIDAMRTLGL DPAMLLFLPR VLALLIMLPI LGLIANLSGL LGGALMSWIE
LGISPAMFQT RLIEGTDINH AVVGLVKAPF FAILIGVVGC HAGMQVEGNA ESLGRMTSGA
VVTAIFAVIV TDAAFSIFFA QMGI
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