Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2049 |
Symbol | |
ID | 5713044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2169530 |
End bp | 2170309 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267971 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001533387 |
Protein GI | 159044593 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.558071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGC CGGTGGAGAA CGTGATCCGG GTGCGCGGGG TGCGGACGCA GTTCGGCACG CATGTGGTCC ATGAAGACCT GGATCTGGAC GTGCGGCGGG GCGAGATCCT GGGCGTGGTC GGCGGCTCGG GCACCGGCAA GTCGGTGCTG CTGCGCACGA TCGCGGGGCT GTTGCGGCCT GCGGCGGGGC GGGTGGAGGT TCTGGGCACC GACATGCTGA GCGCCGACGA GGCGACGCGG GCCGCGGTCG AGGCGCGCTG GGGCGTGATG TTCCAGGACG GTGCCCTGTT TTCCTCCCTG ACCGTGCGCG AGAATGTCGA AGTTCCCATG CGCGCGATCC CGGGTCTGGA TGCGGCGACG CGCCGGGCAT TGGCTGCGCT GAAGGTGTCG ATGGTGGGAC TGCCGCCGGT GGCGGAGGAC AAATACCCCT CCGAGCTGTC TGGGGGGATG CGCAAGCGCG CGGGATTGGC GCGGGCGCTG GCCCTCGACC CGGAGATCGT GTTCCTCGAC GAGCCGACCG CCGGGCTCGA CCCCATCGGG GCGGCGGATT TCGACACGTT GATCAAGGGG CTGAGCACGG ATCTGGGCCT GACGGTCTTT CTGGTCACCC ATGACCTTGA TACGTTGCAC GCGATCTGCG ACAGGATCGC TGTCCTTGCG GAACGCAAGG TGCTGGTCAC GGGCACCATG GATGAGATGC TGAAGGTGGA TCACCCTTGG GTGCACGCGT ATTTCCACGG CCCCCGTGCC CGGGCGGCGC TTGAGACGGC AGGCGGCTGA
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Protein sequence | MAEPVENVIR VRGVRTQFGT HVVHEDLDLD VRRGEILGVV GGSGTGKSVL LRTIAGLLRP AAGRVEVLGT DMLSADEATR AAVEARWGVM FQDGALFSSL TVRENVEVPM RAIPGLDAAT RRALAALKVS MVGLPPVAED KYPSELSGGM RKRAGLARAL ALDPEIVFLD EPTAGLDPIG AADFDTLIKG LSTDLGLTVF LVTHDLDTLH AICDRIAVLA ERKVLVTGTM DEMLKVDHPW VHAYFHGPRA RAALETAGG
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