| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2045 |
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| Symbol | xsc |
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| ID | 5713040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2164196 |
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| End bp | 2165974 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267968 |
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| Product | sulfoacetaldehyde acetyltransferase |
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| Protein accession | YP_001533384 |
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| Protein GI | 159044590 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03457] sulfoacetaldehyde acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.460294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATGA CGACGGAAGA GGCGTTTATC AAGGTTTTGC AGCGGCATGG TGTGGACCAT
GCGTTCGGGA TCATCGGGTC TGCGATGATG CCGATTTCGG ACCTGTTTCC GGAAGCGGGG
ATCACCTTCT GGGACTGTGC GCACGAGGGC TCTGCGGGGA TGATGGCCGA TGGCTTCACC
CGGGCGTCGG GGCGGATGTC GATGATGATC GCCCAGAACG GCCCCGGCAT CACCAATTTC
GTCACCGCCG TGAAGACCGC CTACTGGAAC CACACGCCGC TTCTGCTGGT CACGCCCCAG
GCGGCCAACA AGACCATCGG CCAGGGCGGC TTCCAGGAGG TCGCGCAGAT GAAGCTTTTC
GAGGACATGG TCGCCTACCA GGAGGAGGTC CGCGATCCCT CGCGCATGGC CGAGGTGCTG
ACCCGGGTGA TCTCCAAGGC GAAAACCCTC TCGGGGCCCG CGCAGATCAA CATCCCGCGC
GATTTCTGGA CCCAGGTGAT CGATATCGAG ATCCCCGAGC CCATCGAATT CGAGCGCTCC
CCGGGCGGCG AGGCGTCGGT GGCGCGCGCC GCGGCGCTGT TGTCGGAGGC GAAAAACCCG
GTGATCCTGA ACGGCGCGGG CGTGGTGCTG TCGGAGGGCG GGATCGCGGC CAGCAAGGCG
CTGGCCGAGC GGCTCGATGC GCCCGTTTGC GTGGGATATC AACACAATGA CGCATTTCCG
GGGGGCCATC CGCTGTTCGC GGGGCCGCTG GGATACAACG GCTCGAAGGC GGCGATGGAG
CTGATTTCCG AGGCCGATGT GGTGCTGGCA CTCGGCACCC GGCTTAACCC GTTCTCAACG
CTTCCGGGCT ACGGAATGGA GTACTGGCCG GCGGATGCGA AAATCATCCA GGTCGACATC
AATTCCGACC GGATCGGGCT GACCAAGAAG ATCAGCGTCG GCATCGTCGG CGACGCGGCC
AAGGTGGCGC GCGGCATCCT GGGCCAGCTG GCCGAGGATG CGGGCGATGC GGGCCGCCAG
GAACGGCGCG ACCGGATCGC GCAGGTGAAA TCCCGCTGGG CCCAGCAGCT CAGCGCCATG
GACCATGAGG AGGACGACCC CGGCACCACC TGGAACGCCC GCGCCCGTGC CGCGAAACCC
GACTGGATGA GCCCGCGCAT GGCCTGGCGC GCGATCACCG CCGCCCTGCC GCGCGACGCG
ATCATCAGCT CGGATATCGG CAACAACTGT GCCATCGGCA ACGCCTATCC GGACTTCGAC
GCGCCGCGCA AATACCTCGC GCCGGGGCTC TTTGGCCCCT GCGGCTACGG GTTGCCGGCG
ATCGTGGGCG CCAAGATCGC CCAACCCGAC ACGCCGGTGG TGGGGTTTGC CGGGGACGGC
GCGTTCGGCA TCGCGGTGAA CGAGCTGACG GCGATCGGCC GCGGCGACTG GCCCGCGATC
ACGCAAGTGG TGTTCCGCAA CTACCAGTGG GGCGCGGAGA AGCGCAATTC CACGCTCTGG
TTCGACGACA ACTTCGTGGG CACCGAGCTC GACGAGGAGG TCTCCTATGC CGGCATCGCG
CGCGCCTGCG GGCTCGACGG CGTGGTCGTG CGCACCATGC AGGAGTTGAC CGACACCCTC
GCAACCGCCA TCAAGGCCCA GATGACCGAG GGCAAAACAA CCCTCATCGA GGTCCTGCTC
AACCAGGAAC TCGGAGAACC ATTCAGAAGA GACGCAATGA AAAAACCAAA CAAGGTCGCA
GGTGTCTCGA AACAGGATAT GATGGTCGAG GCTGGCTGA
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| Protein sequence | MRMTTEEAFI KVLQRHGVDH AFGIIGSAMM PISDLFPEAG ITFWDCAHEG SAGMMADGFT
RASGRMSMMI AQNGPGITNF VTAVKTAYWN HTPLLLVTPQ AANKTIGQGG FQEVAQMKLF
EDMVAYQEEV RDPSRMAEVL TRVISKAKTL SGPAQINIPR DFWTQVIDIE IPEPIEFERS
PGGEASVARA AALLSEAKNP VILNGAGVVL SEGGIAASKA LAERLDAPVC VGYQHNDAFP
GGHPLFAGPL GYNGSKAAME LISEADVVLA LGTRLNPFST LPGYGMEYWP ADAKIIQVDI
NSDRIGLTKK ISVGIVGDAA KVARGILGQL AEDAGDAGRQ ERRDRIAQVK SRWAQQLSAM
DHEEDDPGTT WNARARAAKP DWMSPRMAWR AITAALPRDA IISSDIGNNC AIGNAYPDFD
APRKYLAPGL FGPCGYGLPA IVGAKIAQPD TPVVGFAGDG AFGIAVNELT AIGRGDWPAI
TQVVFRNYQW GAEKRNSTLW FDDNFVGTEL DEEVSYAGIA RACGLDGVVV RTMQELTDTL
ATAIKAQMTE GKTTLIEVLL NQELGEPFRR DAMKKPNKVA GVSKQDMMVE AG
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