| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2038 |
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| Symbol | |
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| ID | 5713033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2157081 |
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| End bp | 2158262 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267962 |
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| Product | putative altronate hydrolase |
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| Protein accession | YP_001533378 |
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| Protein GI | 159044584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.624711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.146869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA AGTATTCAAA CCTGACCGTC AAGGGCTACC GGCGTGAAAA CGGCCGCGTG
GGCGTGCGCA ACCATGTGCT CATCCTGCCC GTGGACGACA TCTCCAACGC CGCCTGCGAG
GCGGTCGCCA ACAACGTCAA GGGCACGTTG GCGATCCCGC ACGCCTATGG CCGCCTGCAG
TTCGGCGAGG ACCTGGAGCT GCATTTCCGC ACGATGATCG GCACCGGCGC GAACCCGAAC
GTGCACTCGG TGGTCGTCAT CGGCATCGAG CCCGGCTGGA CCAAGCGCAT CGCCGACGGC
ATCCGCGAGA CCGGCAAGGA AGTAGCCGAA TTCTCGATCG AGCAGAAGGG CGACTTCGAA
ACGATCCGCG CGGCCTCCTG GGCGGCGAAG GATTTCGTCC ACAAGGCGAC CGAGATGCAG
CGCGAAGAGT GCAGCATCTC CGAGCTGTGG GTGTCCACCA AATGCGGCGA GAGCGATACC
ACCACGGGCC TCGGATCCTG CCCCACGGTC GGCAACATGT ATGACAAGCT CCTGCCCGAA
GGGATCACCG GGTTTTTTGG CGAGACCTCC GAGATCACCG GGGCCGAGCA TATCTGCCAG
AAGCGCGCGA TCAACGAAGA GGTCGGGCAG CGCTGGTACA AGATGTGGAA GGCCTATCAG
GATGACGTGA TCTTCGCGCA CCAGACCGAT GACCTGAGCG ACAGCCAGCC CACCAAGGGC
AACATCGAAG GCGGTCTGAC CACGATCGAG GAGAAGGCCC TTGGCAACCT GGAAAAGATC
GGCCGCACCT CGCAGTTCAT CGATATCCTG GAGCCTGCCG AGCAGCCCAA GTCCGGCAAC
GGGCTCTACT TCATGGACAG CTCTTCGGCG GCCGCCGAAT GCGTGACGCT GATGGCGGCG
GGCGGCGCGG TGATCCACAC CTTCCCCACC GGCCAGGGCA ACGTGGTCGG CAACCCGATC
GTGCCGGTGA TCAAGATCAC CGCGAATCCG CGCACCGTGC GCACCATGGC CGAGCATGTG
GATGTGGATG TCTCCGGCAT CCTGCGTCGG GAGATGACCA TCGACGAGGC GGGCGATGCG
CTGATCGAGA TGATCTGCCG AACCGCCAAT GGCCGCAACA CCGCCGCCGA GGCGCTGGGG
CATCGGGAGT TCTCGATGAC CAAGCTCTAC CGCTCGGCGT AA
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| Protein sequence | MASKYSNLTV KGYRRENGRV GVRNHVLILP VDDISNAACE AVANNVKGTL AIPHAYGRLQ
FGEDLELHFR TMIGTGANPN VHSVVVIGIE PGWTKRIADG IRETGKEVAE FSIEQKGDFE
TIRAASWAAK DFVHKATEMQ REECSISELW VSTKCGESDT TTGLGSCPTV GNMYDKLLPE
GITGFFGETS EITGAEHICQ KRAINEEVGQ RWYKMWKAYQ DDVIFAHQTD DLSDSQPTKG
NIEGGLTTIE EKALGNLEKI GRTSQFIDIL EPAEQPKSGN GLYFMDSSSA AAECVTLMAA
GGAVIHTFPT GQGNVVGNPI VPVIKITANP RTVRTMAEHV DVDVSGILRR EMTIDEAGDA
LIEMICRTAN GRNTAAEALG HREFSMTKLY RSA
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