| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2026 |
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| Symbol | |
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| ID | 5713021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2146276 |
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| End bp | 2147046 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267950 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_001533366 |
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| Protein GI | 159044572 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0388826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA CAGTCGATTT GAACGCCGAT ATGGGCGAAA GCTTCGGTCC CTGGCCCATG
GGCGACGACG CGGCCCTGCT GCGCACCATC ACCTCGGCCA ATATCGCCTG CGGCGCCCAT
GCGGGCGACT GGGACGTGAT GGCACGGACC ATGGCGCTGG CGGTCGAGAA CGGCGTGGGC
ATCGGCGCCC ATCCCGGCCT GCCGGACCTG CAGGGCTTCG GGCGGCGCCG GATGCAGATG
CCCCATGACA GCCTGCGCAA CCTCGTGGCC TGGCAGGTCG GCGCGGCCCA GGCCATGGCG
CGGCAGGCGG GCGGGGCGGT GCGGCACGTC AAGTTGCACG GGGCGTTGGC CAACATGTGC
TCGGAGGATG CCGAGATGGC GCGCGCCTGC TACGAGGGTG CGCTGGCTGC CGACCCGGAC
GTGATCATCA TGGTACTGGC CGCCACGGCG CAGCAGACGG CGGTCGAGGC GCTGGGCTGC
CGCTGGGCCG CCGAGATCTT CGCCGACCGC GCCTATAACG ACGACGCGAC CCTGGTGGAC
CGCCGCCTGC CCGGGGCCGT GATCCACGAC CCCGACCGGG CCGGCGCGCG CATGGTCGAG
ATGGTCAAGG CCGGTGCGAT CATCACCGAA AGCGGTGCTC ATATCTCCAC GCCCATTGAC
ACCATTTGCC TGCATGGCGA CACGGCCGAG GCCGTGGGCA TTGCCCGCGC CACCCGCGCG
GCGCTGGAGG ATGCGGGCAT CACGCTGGCG CAGTTCCCGG GCCGCCGCTG A
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| Protein sequence | MTITVDLNAD MGESFGPWPM GDDAALLRTI TSANIACGAH AGDWDVMART MALAVENGVG
IGAHPGLPDL QGFGRRRMQM PHDSLRNLVA WQVGAAQAMA RQAGGAVRHV KLHGALANMC
SEDAEMARAC YEGALAADPD VIIMVLAATA QQTAVEALGC RWAAEIFADR AYNDDATLVD
RRLPGAVIHD PDRAGARMVE MVKAGAIITE SGAHISTPID TICLHGDTAE AVGIARATRA
ALEDAGITLA QFPGRR
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