| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2019 |
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| Symbol | |
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| ID | 5713014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2137715 |
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| End bp | 2139322 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267943 |
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| Product | putative glutamate synthase [NADPH] large chain |
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| Protein accession | YP_001533359 |
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| Protein GI | 159044565 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.054741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTT ATTCGATTTT CCTCGCTGTC ACCGTGCTGA CCCTCGCGTC GCTGGTCGCT
GTTGCATGGA GCGTCTGGTT CTGGATCCCG GTGGCCTTCT TCGGGGGGCT GTCCCTTCTG
GGCCTCTATG ACGTGATCCA GTCGCGGCAC TCGATCCTGC GCAATTACCC GGTGATCGGG
CATATGCGCT TCCTGTTCGA AGGCATCCGC CCCGAGATCC GGCAATACCT GATCGAAAGC
GACCAGGACG AGGAGCCGTT CTCCCGCGAC ATGCGCTCGA TCATCTACCA GCGCGCCAAG
GGCGTCGAGG ACAAGCGCCC CTTCGGCACC CGGATGCGGG TCTACGATTC GGGCTACCAG
TGGCTGACCC ACTCGGTCCG CCCGGTGCAT ATCGCGGACA CCGATTTCCG CGTCCGCATC
GGCGGGCCGG ACTGCACCCA ACCCTATGAC GCCTCGATCT ACAACATCTC GGCGATGAGC
TTCGGGGCGC TCTCGGGCAA TGCGATCCAG GCGCTCAACA AGGGCGCGAA GGCAGGCGGC
TTTGCCCATG ACACTGGCGA GGGCGGGGTC AGCATCCACC ACCGCGAAGG CGGCGGTGAC
CTGATCTACC AGGTGGGCTC GGGCTATTTC GGCTGCCGCA CCCCGGAGGG CGTGTTCGAC
CCCGAGAAAT TCCGCGAAAC CGCCGCCAAC CCGCAGATCA AGCTGATCGA GCTGAAGCTG
TCCCAGGGCG CCAAGCCCGG TCATGGCGGG GTGCTGCCGG CCTCGAAGAT CACGCCCGAG
ATCGCCGAGG CGCGCGGCGT GCCCATGGGC GAGGACTGCG TCTCACCCGC CTCCCACAGC
GCGTTTTCCA CCCCGATCGA GATGATGGAA TTCATTGGCA AACTGCGCGA ATTGTCGGAC
GGCAAGCCCG TGGGTTTCAA GATGTGCATC GGCCACCGGC GCGAATTCAT GTGCATGGTC
AAGGCGATGC TGGAGACCGA CATCACCCCC GACTTCATCG TCATCGACGG GAAAGAGGGC
GGCACCGGTG CCGCGCCGCT GGAATTCGCC AACCGCATGG GCATGCCGCT GGTCGAGGGG
CTGACTTTCG CCCACAACAC CCTGCGTGGT GCTGGGGTCC GTGATCGGAT CAAGATCGGT
GCCTCGGGCA AGATCGTCAC GGCCTTCGAC ATGGCCAAGG TGCTGGCACT GGGCGCGGAC
TGGGCCAATT CCGCCCGCGG CTTCATGTTC TCCATCGGCT GCATCCAGGC CCAGGCCTGC
CACACCAATG CCTGCCCGGT GGGCGTCGCG ACCCAGGACC CGCTGCGCCA GCGGGCGCTG
GATGTCGCAG ACAAATCCGT GCGGGTTGCG CGATTCCATC GCAACACGCT CAAGGCACTG
GGCGAGATGA CCGGTGCGGC CGGGCTGGAA AGCCCCGGCG ACTTCCTGCC CTATCACCTG
ATGGTGCGCG AGACCGACCG CGGCATGGTC ACCGGGGACG AGGTGTACCC CTACCTGCCC
GAAGGCTTCC TGCTGCGCGG GGAGGAAGAC GCCTTCGGCT ACCTGCGCCG TTGGCGCCGC
GCCGATGCAA ATGACTTCTC ACCCGCCGAC ATGGTCAAGG GCACCTGA
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| Protein sequence | MSRYSIFLAV TVLTLASLVA VAWSVWFWIP VAFFGGLSLL GLYDVIQSRH SILRNYPVIG
HMRFLFEGIR PEIRQYLIES DQDEEPFSRD MRSIIYQRAK GVEDKRPFGT RMRVYDSGYQ
WLTHSVRPVH IADTDFRVRI GGPDCTQPYD ASIYNISAMS FGALSGNAIQ ALNKGAKAGG
FAHDTGEGGV SIHHREGGGD LIYQVGSGYF GCRTPEGVFD PEKFRETAAN PQIKLIELKL
SQGAKPGHGG VLPASKITPE IAEARGVPMG EDCVSPASHS AFSTPIEMME FIGKLRELSD
GKPVGFKMCI GHRREFMCMV KAMLETDITP DFIVIDGKEG GTGAAPLEFA NRMGMPLVEG
LTFAHNTLRG AGVRDRIKIG ASGKIVTAFD MAKVLALGAD WANSARGFMF SIGCIQAQAC
HTNACPVGVA TQDPLRQRAL DVADKSVRVA RFHRNTLKAL GEMTGAAGLE SPGDFLPYHL
MVRETDRGMV TGDEVYPYLP EGFLLRGEED AFGYLRRWRR ADANDFSPAD MVKGT
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