Gene Dshi_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2018 
Symbol 
ID5713013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2137369 
End bp2137632 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content61% 
IMG OID641267942 
Producthypothetical protein 
Protein accessionYP_001533358 
Protein GI159044564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0539041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG TTTACAAGAA CCGGCAACCC GGCATGACCA GCCCTGCCGT TGCAGCCGAA 
ATTATCATTC CCGCGAATGG CCGGGAACTG AACTACGCGA CGCGCGCGGT CTATGTCGGC
AGCGGCGGAG ATCTGTCCAT GGAGCTGCTG AACGGCGACG TGGTCACGTT CAAGAACCTG
GCATCCGGAA CGCTTCTTCC GGTGCGAGCA CGGCGGGTGC GCAACAGCGA TACGACCGCA
AGTGATCTGA TCGGGCTGCG GTGA
 
Protein sequence
MIDVYKNRQP GMTSPAVAAE IIIPANGREL NYATRAVYVG SGGDLSMELL NGDVVTFKNL 
ASGTLLPVRA RRVRNSDTTA SDLIGLR