| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2016 |
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| Symbol | ugpE3 |
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| ID | 5713011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2135361 |
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| End bp | 2136215 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267940 |
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| Product | sn-glycerol-3-phosphate transport system permease protein |
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| Protein accession | YP_001533356 |
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| Protein GI | 159044562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0189923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGC GGTCTGGCAT GGTCGAGAAG CGCGGGCTGG GCCTGTGGCT GACCCATTTG
GGTCTGATCA TCGGGGTGGC GTTCATCTTC TTTCCGATCT GGCTGGCCTT CGTGGCCTCG
ACGGTCAGCC AGCCCGAGAT CGTGCGCCCG CCCATGCCCC TGCTGCCCGG GGACCAGTTG
GTCGAGAACT ACACCCGCGC CCTGACCGCG GGGATCAATG CGCCGGTCGC ACTGATGCTG
GGCAATTCAC TGATCATGGC GTTGGGGATC GCGCTGGGAA AGATCGCGAT CTCGCTGCTG
TCGGCCTTTG CCATCGTGTA TTTCCGGTTT CCGGGGCGGA TGCTGTTTTT CTGGCTGATC
TTCCTGACGC TGATGCTGCC GGTGGAGGTG CGGATCGTGC CGACCTACGA GGTGATCGCG
AATTTCGGGA TGCTGAACAG CTACCAAGGG TTGATCCTGC CGCTGGTGGC CTCGGCCACG
GCGACGTTCC TGTTTCGGCA ATTCTTCATG ACGGTGCCGG ATGAGCTGGC CGAGGCCGCG
CGGGTCGACG GGGCGCGGCC CATGCGGTTT TTCTTCGACA TCCTGCTGCC GATGAGCCGG
ACGAACATCG CAGCGCTGTT CGTGATCCTG TTCATCTATG GCTGGAACCA GTATCTCTGG
CCGCTTTTGA TCACGACCGA CCCGGAGATG AACACCATCG TCATGGGCAT CAAGCAGATG
TTCCCATCAG GTGACGACAC CGCCGACTGG CCGGTGATCA TGGCGACCTC GATCCTGGCG
ATGGTGCCGC CGGTGATCGT GGTGATCACC ATGCAGCGGC TGTTCGTGCG CGGACTTGTG
GAAAGTGAGA AGTAG
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| Protein sequence | MAERSGMVEK RGLGLWLTHL GLIIGVAFIF FPIWLAFVAS TVSQPEIVRP PMPLLPGDQL
VENYTRALTA GINAPVALML GNSLIMALGI ALGKIAISLL SAFAIVYFRF PGRMLFFWLI
FLTLMLPVEV RIVPTYEVIA NFGMLNSYQG LILPLVASAT ATFLFRQFFM TVPDELAEAA
RVDGARPMRF FFDILLPMSR TNIAALFVIL FIYGWNQYLW PLLITTDPEM NTIVMGIKQM
FPSGDDTADW PVIMATSILA MVPPVIVVIT MQRLFVRGLV ESEK
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