| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2012 |
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| Symbol | |
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| ID | 5713007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2131292 |
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| End bp | 2132107 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267936 |
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| Product | putative ABC transporter inner membrane component |
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| Protein accession | YP_001533352 |
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| Protein GI | 159044558 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.100736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00339933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGGTTC TGGACAAGGC AGGGACGCAG GTCTGGCATC GCCGGACCCG CAACGAAAGT
CTGGTACGCT GGTTCGGCTG GCTGCTGGGG GTGGCGGTGT TCGTGGTCTG CTGGCAGCGG
ATCTCGGACG CGACCACGTG GTTCTTCGTC TGGGACGCGC CGCGGATCGC CGACGATATC
TGGACCCGGG CCACCCCGCC GCGGTGGGAA TACATCACCC AGCTGGGGCG GCCGATCTGG
GACACGATCA ACATCGCCAC GCTGGGCACG ATCATCGCAC TCTTTCTCGC GGTGCCGGTG
GCGTTCCTGG CGGCGCGCAA CACGACGCCC TCGGCGCTGA TCATCCGGCC CATCGCACTT
TTGATCATAG TGTCGACCCG GTCGATCAAC TCGCTGATCT GGGCGCTTCT GCTGATCGCG
ATCATCGGGC CGGGGGTGCT GGCCGGTGTG GTCGCCATCG CGATCCGGTC CATCGGGTTC
TGCGCCAAGC TGCTTTACGA GGCGATCGAG GAGATCGACA TCAAGCAGGT CGAGGCGATC
ACCGCCACGG GCGCCTCGCG CTGGCAGGTC ATGGCCTACG GGATCGTGCC GCAGATCATG
CCCGCCTTCG CCGGGATCGC GGTGTTCCGC TGGGACATCA ACATCCGCGA ATCCACGGTG
CTGGGGCTTG TGGGCGCGGG GGGCATCGGG CTGCAGCTGT CATCCTCGCT CAACGTGCTG
GCTTGGCCGC AGGTGAGCTT GATCCTGCTG GTGATCCTGG CGGCTGTCGT GATCAGCGAA
TGGGTCTCGG CCAAGGTGCG GGGCGCAATC ATTTGA
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| Protein sequence | MPVLDKAGTQ VWHRRTRNES LVRWFGWLLG VAVFVVCWQR ISDATTWFFV WDAPRIADDI
WTRATPPRWE YITQLGRPIW DTINIATLGT IIALFLAVPV AFLAARNTTP SALIIRPIAL
LIIVSTRSIN SLIWALLLIA IIGPGVLAGV VAIAIRSIGF CAKLLYEAIE EIDIKQVEAI
TATGASRWQV MAYGIVPQIM PAFAGIAVFR WDINIRESTV LGLVGAGGIG LQLSSSLNVL
AWPQVSLILL VILAAVVISE WVSAKVRGAI I
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