| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2006 |
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| Symbol | |
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| ID | 5713001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2126545 |
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| End bp | 2126964 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267930 |
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| Product | putative blue-light photoreceptor |
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| Protein accession | YP_001533346 |
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| Protein GI | 159044552 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0395879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATGCGCA GACATTATCG CGACCTGATA CGGAACACGC CCATGCCCGA CACACCGCAA
GACATCGCAG ACCTCCGCGC CCTTCTGGAC GAGGACGAGG CCGAGATGAG CGTCGTCTTC
TCCGACCCGT CGCAGCCCGA CAACCCGATG ATCTATGTCA GCGACGCCTT CCTGGTCCAG
ACCGGCTACA CCCTCGAAGA GGTGCTGGGC CGCAACTGCC GTTTCCTGCA GGGGCCCGAC
ACCAACCCCC ATGCGGTCGA GGCGATCCGC CAGGGCCTGA AGGCCGAAAC CCGCTTCACC
ATCGACATCC TGAATTACCG CAAGGACGGC TCGGCCTTCG TCAACCGCTT GCGCATCCGT
CCGATCTATG ACCCCGAGGG CAACCTGATG TTCTTCGCAG GCGCCCAGAA CCCGGTCTGA
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| Protein sequence | MMRRHYRDLI RNTPMPDTPQ DIADLRALLD EDEAEMSVVF SDPSQPDNPM IYVSDAFLVQ
TGYTLEEVLG RNCRFLQGPD TNPHAVEAIR QGLKAETRFT IDILNYRKDG SAFVNRLRIR
PIYDPEGNLM FFAGAQNPV
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