| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1997 |
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| Symbol | xylB2 |
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| ID | 5712992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2115813 |
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| End bp | 2117255 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267921 |
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| Product | xylose kinase |
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| Protein accession | YP_001533337 |
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| Protein GI | 159044543 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0574625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.349837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTGG GACTGGATCT GGGGACATCG GGGCTCAAGG CGGTCCTGAT CGACGAAAAC
CAGGCGCTGG TGGCCGAGGC GACCGCCCCG CTGGAGGTCG CGCGCCCCCA TCCCGGCTGG
TCGGAGCAGA TGCCGTGCGA CTGGCTGGCG GCGACCGAGG CGGCGATGGC CGCGCTGGGT
GCCCGCGCGG ACCTGTCGGG GGTGCGGGCG ATTGGCCTTT CGGGGCAGAT GCACGGGGCC
ACGCTGCTCG ATGCGTCCCA CGAGGTGCTG CGGCCCTGCA TCCTGTGGAA CGATACGCGC
GCGGCGGCGG AGGCGGCCGC ACTGGATGCC GACCCGGCAT TTCGCTCTGT GACGGGGAAT
ATCGTGTTTC CCGGCTTCAC CGCGCCGAAG CTCGCCTGGG TGCGCGCCCA TGAGCCGGAC
GTGTTCGATC GCACGGCGCT GGTGCTGCTG CCCAAGGATT ACCTGCGGCT CTGGCTGACC
GGGGAGGCGG TGGCGGAGAT GTCCGATGCC GCCGGCACCT CCTGGCTCGA CACCGGCGCG
CGGGACTGGT CCGCGCCGCT GCTGGCGGCC ACGGGGCTGA GCCGGGATCA CATGCCCCGG
CTGGTAGAGG GATCCGAGGT CTCGGGCACC CTGCGCGACA GTCTCGCCGA TGCCTGGGGT
CTGCCGCGCG GCGTGCCGGT GGCAGGCGGG GGCGGCGACA ACGCCGCCTC GGGCATCGGG
ATGGGCGTGG TGCGGGCGGG CGACGGGTTC GTCTCGCTGG GCACCTCGGG TGTGCTGTTC
GCGGCCTGCG ACGCCTATGC GCCGGACCCG GCCACGGCGG TGCACACGTT CTGCCATGCC
CTGCCGGAGA CCTGGCATCA GATGGGGGTG ATCCTGGCGG CCACGGACGC GCTCAATTGG
TTCGCGCGGA CCTGTGGGAC CGATGCAGCG ACGCTGACGG GCGGGCTCGG CCCCCTGCAG
GCGCCCGGGC GCCCGGTCTT TCTGCCCTAT CTGGGCGGCG AGCGGACGCC CCATAACGAT
GCGGCCATTC GCGGCGCGTT TGCCCGCATC GACCATGCCG CGGACCGTGA TGCGCTGGCG
CGCGCGGTGC TCGAAGGCGT GGCCTTTGCC TTCCGCGACA GCTTCGACGC GCTGGCGGCC
ACGGGCACGC GGCTGGAGCG GCTGGTGGCC GTGGGCGGTG GGGCCAAGTC TGACACCTGG
GTGCGGATGA TCGCGACGCT GATCGGCCTG CCCATCGACC TGCCGCAAGC GGGCGATTAC
GGCGGCGCGT TCGGCGCGGC ACGGCTCGGC ATGATGGCGG CGACGGGGCA GGGGGCGGCG
CTGGCCACCC GGCCCCCCAT CGCGCGGAGC CTCGATCCGG TGCCGGCCCT TGCCGACGCC
TTCGGCGAGG CCCATGCCAC CTACCGCGCC ACATACACCG CCCTGAAAGG ACTGGACCGA
TGA
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| Protein sequence | MYLGLDLGTS GLKAVLIDEN QALVAEATAP LEVARPHPGW SEQMPCDWLA ATEAAMAALG
ARADLSGVRA IGLSGQMHGA TLLDASHEVL RPCILWNDTR AAAEAAALDA DPAFRSVTGN
IVFPGFTAPK LAWVRAHEPD VFDRTALVLL PKDYLRLWLT GEAVAEMSDA AGTSWLDTGA
RDWSAPLLAA TGLSRDHMPR LVEGSEVSGT LRDSLADAWG LPRGVPVAGG GGDNAASGIG
MGVVRAGDGF VSLGTSGVLF AACDAYAPDP ATAVHTFCHA LPETWHQMGV ILAATDALNW
FARTCGTDAA TLTGGLGPLQ APGRPVFLPY LGGERTPHND AAIRGAFARI DHAADRDALA
RAVLEGVAFA FRDSFDALAA TGTRLERLVA VGGGAKSDTW VRMIATLIGL PIDLPQAGDY
GGAFGAARLG MMAATGQGAA LATRPPIARS LDPVPALADA FGEAHATYRA TYTALKGLDR
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